Actinomadura parvosata subsp. kistnae: BKM31_51670
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Entry
BKM31_51670 CDS
T04759
Name
(GenBank) RNA-splicing ligase RtcB
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
noa
Actinomadura parvosata subsp. kistnae
Brite
KEGG Orthology (KO) [BR:
noa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
noa03016
]
BKM31_51670
Enzymes [BR:
noa01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
BKM31_51670
Transfer RNA biogenesis [BR:
noa03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
BKM31_51670
Prokaryotic type
tRNA splicing ligases
BKM31_51670
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
AQZ68820
UniProt:
A0A1V0AF12
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All DBs
Position
11435000..11436187
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AA seq
395 aa
AA seq
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MTYNEVTGTRRPLRMWAEPETVEPQAMQQLRNVADLEWVHGVAVMPDVHHGKGATVGSVI
AMRDAVSPAAVGVDIGCGMTAVKTSYQAARLPDNLAYLRGRLEQAVPVGFGHHKRPVDPA
QVQGMKAAGWAEFWKGFDELAPAVKARRERAEVQMGTLGGGNHFLEVCADDEGWVWVVLH
SGSRNIGKELAEHHIGVARGLSHNQGLVDRDLAVFLGGTPEMHAYRRDLFWAQDYARRNR
ALMMGLVCDVLRRHLPGITFEQPISCHHNYVAEERYDGVDVLVTRKGAIRAGAGELGIIP
GSMATGTYIVKGLGNAAAFNSASHGAGRRMSRNKAKKTFTVKDLEEQTAGVECRKDSGVL
DEIPGAYKDLESVMAAQTDLVQVVAHLRQLICIKG
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgacgtacaacgaggtgaccggaacgcggcggccgctgcggatgtgggcggagcccgag
acggtcgagccgcaggcgatgcagcagctgcgcaacgtcgcggacctggagtgggtgcac
ggtgtcgccgtcatgccggacgtgcaccacggcaagggcgcgacggtgggctcggtcatc
gcgatgcgcgatgccgtctcgcccgcggccgtcggcgtggacatcgggtgcggcatgacc
gcggtcaagacgtcgtaccaggcggcgcggctgcccgacaacctcgcgtacctgcgcggc
cggctggagcaggccgtgccggtcgggttcggccaccacaagcggccggtcgaccccgcc
caggtgcaggggatgaaggcggccgggtgggcggagttctggaagggcttcgacgagctg
gcgccggccgtgaaggcgcggcgcgagcgggccgaggtgcagatgggcacgctcggcggc
ggcaaccacttccttgaggtgtgcgcggacgacgagggctgggtgtgggtcgtcctgcac
tccgggtcgcgcaacatcggcaaggagctggcggagcaccacatcggggtggcgcgcggg
ctctcgcacaaccaggggctggtggaccgggacctggcggtgttcctcggcggcacgccc
gagatgcacgcctaccggcgcgacctgttctgggcgcaggactacgcgcggcgcaaccgg
gcgctgatgatggggctggtgtgcgacgtgctgcgccggcacctgcccggcatcacgttc
gagcagccgatctcctgccaccacaactacgtggccgaggagcggtacgacggggtcgac
gtgctggtcacccgcaagggcgcgatccgggccggcgccggcgagctgggcatcatcccg
ggctcgatggccaccggcacctacatcgtcaagggcctcgggaacgcggcggcgttcaac
tcggcctcgcacggggcggggcgccggatgagccggaacaaggccaagaagaccttcacc
gtcaaggacctggaggagcagacggcgggggtggagtgccgcaaggactccggggtgctg
gacgagatcccgggggcgtacaaggacctggagtcggtgatggcggcgcagacggacctc
gtgcaggtggtcgcgcacctgcggcagctcatctgcatcaagggctga
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