Actinomadura parvosata subsp. kistnae: BKM31_57320
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Entry
BKM31_57320 CDS
T04759
Name
(GenBank) ribonuclease E/G
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
noa
Actinomadura parvosata subsp. kistnae
Pathway
noa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
noa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BKM31_57320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
noa03019
]
BKM31_57320
03009 Ribosome biogenesis [BR:
noa03009
]
BKM31_57320
Enzymes [BR:
noa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
BKM31_57320
Messenger RNA biogenesis [BR:
noa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BKM31_57320
Ribosome biogenesis [BR:
noa03009
]
Prokaryotic type
rRNA processing factors
BKM31_57320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
Motif
Other DBs
NCBI-ProteinID:
AQZ71412
UniProt:
A0A1V0AMT3
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All DBs
Position
12735844..12738594
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AA seq
916 aa
AA seq
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MPAEVAEEAPAKRRRTRKKAETEEAAAAPAAEVSGAGAGEVPSGDETVAAEAAGTTRRRT
RRTTTAKAGKAEAEGAETAAGEAEAPVSTRRRRAAATGAGTTGEAVSDTEGAAAGTAAGV
EAAEAGVAGAGVAEAGVAGAGVAGGGAAADAAAGVAADRGAEGAEGAEDAGVQGDEADED
DILEILPEDEPLDDEPAGEDLDEESVRPSLLADPFGLTARRTVEPGSTAFQRPAAIFAPL
FQAPDPSQAKPAVQRKPEPQAAPEPEEAEEPVEEIVAEDESDLDTSEEQEEEEEEGGSRR
RRRRRGGRGRGKARERDEAEDGEESEEEGDEEQAEEGQEEEASTSRRRRRRRRRGTEEGT
EPASDDPPNTVVRIRAPRSGRTATLDTATDGVQSVRGSTRLEAKKQRRREGRELGRRRPP
VITESEFLARRESVDRMMVVRRHGDRTQIAVLEDGVLVEHYVNREASQSYVGNVYLGKVQ
NVLPSMEAAFVDIGKGRNAVLYAGEVNFDTAGLEGQPKRIESALKSGQSVLVQVTKDPIG
HKGARLTSQISLPGRYLVYVPDGSMTGISRKLPDKERTRLKSILKKVMPENAGVIVRTAA
EGASEEELARDVARLSAQWENIQKKAKSASPPELLSAEPDLTIRVVRDVFNEDFTNLVVQ
GDDAWNTVDEYVKYVAPHLAERLSKWDDGEHGDVFESYRIDEQLGKALERKVWLPSGGSL
VIDRTEAMTVVDVNTGKFTGQGGNLEETVTRNNLEAAEEIVRQLRLRDIGGIIVIDFIDM
VLESNRDLVLRRLLECLARDRTKHQVAEVTSLGLVQMTRKRVGQGLLEAFSTPCECCNGR
GLLVSTEPVESKPEPRGTQGKMAIEKTVSDKVSAAKDSSSRDTVTGALEDVPAEDDQANQ
TSGRGRRRSRRAKSAE
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgccgaggtcgcggaggaggcgcccgccaagcggcgccgcacgcgcaagaaggcc
gagacggaagaggccgcggcggcccctgccgccgaggtgtccggcgccggagccggcgaa
gtgccctccggtgatgagacggtggccgcggaggcggccgggaccacgcggcgccgcacg
cgcaggaccacgacggccaaggccggcaaggcggaggccgagggcgctgagacggctgcc
ggtgaggctgaggcgccggtcagcacccgcaggaggcgggccgcggcgactggtgccggg
acgaccggcgaggccgtgagcgacactgagggcgccgcggcggggactgccgcgggcgtc
gaggccgcggaggccggggtcgcaggggccggtgtcgcagaagccggtgtcgcaggggct
ggggtcgctggtggcggtgccgccgccgatgccgctgccggtgtcgctgccgaccggggc
gctgaaggcgccgagggtgctgaagacgcgggcgttcagggtgacgaggcggacgaggac
gacatcctggagatcctgcccgaggacgagccgctcgacgacgagcccgccggcgaggac
ctcgacgaggagagcgtgcggccgagcctgctcgccgacccgttcgggctgaccgcgcgg
cgcacggtcgagccgggcagcaccgcgttccagcggccggcggccatcttcgcgccgctg
ttccaggcccccgacccgagccaggccaagccggccgtgcagcgcaagcccgagccgcag
gccgctcccgagcccgaggaggccgaggagccggtcgaggagatcgtggccgaggacgag
tccgacctcgacacctccgaggagcaggaggaggaagaggaggagggcggcagccgccgc
cgtcgccgccgcaggggcggccggggccgcggcaaggcgcgcgagcgggacgaggccgag
gacggcgaggagtccgaggaggagggcgacgaggagcaggcggaggaaggccaggaagag
gaggcctccacgtcgcgccgccgtcgccgtcgccgccgcaggggcaccgaggagggcacc
gagccggccagcgacgacccgccgaacacggtggtgcgcatccgcgcgccgcgctccggc
cgtacggcgacgctcgacaccgccaccgacggcgtgcagagcgtgcgcggctccacccgg
ctggaggccaagaagcagcgccgccgcgaggggcgcgagctgggccgccggcgtccgccg
gtgatcaccgagtcggagttcctggcccgccgcgagtcggtggaccgcatgatggtggtg
cgccggcacggcgaccgcacgcagatcgcggtgctggaggacggcgtgctcgtcgagcac
tacgtcaaccgcgaggccagccagtcgtacgtcggcaacgtctacctcggcaaggtccag
aacgtgctgccctcgatggaggcggcgttcgtcgacatcggcaagggaaggaacgcggtc
ctgtacgccggcgaggtgaacttcgacaccgccgggctggagggccagccgaagcggatc
gagtcggcgctgaagtcgggccagtcggtgctcgtgcaggtcacgaaggacccgatcggc
cacaagggcgcccggctcacctcgcagatcagccttcccggccgttacctcgtgtacgtg
ccggacggttcgatgaccggcatcagccgcaagctgcccgacaaggagcgcacgcggctg
aagagcatcctgaagaaggtcatgccggagaacgcgggcgtcatcgtccgtaccgcggcc
gagggcgcctccgaggaggagctggcccgcgacgtggcccggctgtcggcgcagtgggag
aacatccagaagaaggccaagtcggccagcccgccggagctgctgtccgccgagcccgac
ctgacgatcagggtcgtgcgtgacgtcttcaacgaggacttcacgaacctggtcgtccag
ggcgacgacgcctggaacacggtggacgagtacgtgaagtacgtcgctccgcacctggcc
gagcggctgtcgaagtgggacgacggcgagcacggcgacgtgttcgagtcgtaccggatc
gacgagcagctcggcaaggcgctggagcgcaaggtgtggctgccgagcggcggctcgctg
gtgatcgaccgtaccgaggcgatgaccgtcgtcgacgtcaacaccggcaagttcaccggc
cagggcggcaacctggaggagaccgtcaccaggaacaacctggaggcggccgaggagatc
gtccgccagctcaggctgcgggacatcggcggcatcatcgtgatcgacttcatcgacatg
gtgctggagtcgaaccgcgacctggtgctgcggcggctgctggagtgcctggcgcgcgac
aggaccaagcaccaggtggccgaggtcacctcgctggggctggtccagatgacgcgtaag
cgggtcggtcaggggctgctggaggcgttctcgacgccgtgcgagtgctgcaacgggcgg
ggtctgctggtctccacggagccggtggagtccaagccggagccgcgcggcacgcagggg
aagatggcgatcgagaagacggtctcggacaaggtttccgcggccaaggactcctccagc
cgtgataccgtgaccggtgcgctggaagatgtcccggccgaggacgaccaggcaaaccag
acttccggcagggggcggagacgctcccgccgagccaagtcggccgagtag
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