Nonlabens sp. MB-3u-79: CW736_01165
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Entry
CW736_01165 CDS
T05253
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
nob
Nonlabens sp. MB-3u-79
Brite
KEGG Orthology (KO) [BR:
nob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nob03009
]
CW736_01165
Enzymes [BR:
nob01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
CW736_01165
Ribosome biogenesis [BR:
nob03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CW736_01165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
MTS
Methyltransf_25
TRM5-TYW2_MTfase
Cons_hypoth95
Methyltransf_15
PrmA
UPF0020
TRAM
FtsJ
Methyltransf_12
Methyltransf_11
PCMT
N6_N4_Mtase
Methyltransf_2
RrnaAD
Motif
Other DBs
NCBI-ProteinID:
AUC78102
UniProt:
A0A2K8X5B4
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All DBs
Position
251365..252783
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AA seq
472 aa
AA seq
DB search
MSKRRKRAQKSFENVPVVDAGAKGKSVAKTEEGEVIFLTDAVPGDVVNIQTFKKKKSFYE
GKVTKFIELSDRRAEPVCKHFNTCGGCKWQHMTYESQLYFKQKEVTENLKRIGHLELPEI
TPIAGSSEQYRYRNKMEFSFSANRWLTLEEIQSDVEIEDKKALGFHIPGMWDKILHLEEC
HLHPQIGEDIRLSVHAFAKAENIAYFNPREKSGTLRTLMLRMSSTGENMVVIQFFEDNEV
QRLALLNHLKESFPQITSLQYIINEKANDTIYDQDVVCYHGRDHIYEEMEGLQFKINAKS
FYQTNSKQAYELYKITRDFAGLTGKELVYDLYTGTGTIAQFVAKEAKHVVGIEAIPVAIE
DAKTNAKHNGIENTTFFAGDMKEVFTQDFIDEHGQPDVIITDPPRDGMHKDVVAQLIKLS
AARIVYVSCNSATQARDLALLDEKYTIAKVQPVDMFPQTHHVENVVLLELKK
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaacgaagaaaaagagctcaaaagtcctttgaaaatgtacctgtagtagatgct
ggtgcaaaaggtaaaagtgttgcaaaaacagaagaaggtgaagtgattttccttacagat
gccgtccctggcgatgtggttaacatacaaacctttaagaaaaagaaatccttttacgaa
gggaaagtaactaaatttattgaattaagcgatagacgtgcagagcctgtttgcaagcat
ttcaacacctgtggaggctgtaaatggcaacacatgacttatgaaagtcagttgtatttt
aagcaaaaagaagtaactgaaaatcttaaaagaataggtcacctggaacttccagaaata
actcctattgctggttcttcagaacaataccgctaccgcaacaaaatggagttcagcttt
tctgcaaaccgttggttgacactagaagagattcaaagtgacgtagaaattgaagataaa
aaggcgcttggctttcatattcctggaatgtgggataaaatcttgcacctggaggagtgc
catctacatcctcaaataggagaagatattagattgagtgtccacgctttcgcgaaagcg
gaaaacatagcctacttcaacccaagagagaaatctggaacattgcgcactttaatgcta
cgcatgtcttctaccggagaaaacatggtggtgatccagttttttgaagataatgaagtg
caaagactcgccttattaaatcatttaaaggaatcctttccacaaattacttctttgcag
tacatcatcaatgaaaaagcaaatgataccatttatgaccaagacgtcgtttgttatcat
ggccgcgatcatatctatgaagaaatggaaggtttgcaattcaagatcaacgccaagtca
ttttatcagaccaatagcaagcaagcttatgaactgtataaaatcacaagagactttgct
ggacttactggaaaagagttggtctatgatttgtatacaggaacagggaccatcgcacaa
tttgtagcaaaagaagcaaaacacgttgtaggaattgaggctattcctgtagctatagaa
gatgctaaaaccaatgcaaagcataacggtatagaaaacactaccttctttgctggcgat
atgaaagaagtctttactcaagactttatcgatgagcacggacaacccgatgtcattatt
accgatccaccacgagacggtatgcacaaagatgtggtcgctcaattaattaaattgagt
gccgcacgcattgtttatgtgagttgtaacagtgcaacacaagcacgtgatcttgcgtta
ctagatgagaaatataccatcgctaaagtacaaccggtagacatgtttcctcaaacacac
catgtggagaatgtggttctattagaattaaaaaaataa
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