Nonlabens sp. MB-3u-79: CW736_01725
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Entry
CW736_01725 CDS
T05253
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
nob
Nonlabens sp. MB-3u-79
Pathway
nob03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nob00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CW736_01725 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nob03021
]
CW736_01725 (rpoC)
03400 DNA repair and recombination proteins [BR:
nob03400
]
CW736_01725 (rpoC)
Enzymes [BR:
nob01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CW736_01725 (rpoC)
Transcription machinery [BR:
nob03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CW736_01725 (rpoC)
DNA repair and recombination proteins [BR:
nob03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CW736_01725 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Peptidase_M23
Biotin_lipoyl_2
Motif
Other DBs
NCBI-ProteinID:
AUC78204
UniProt:
A0A2K8X5I1
LinkDB
All DBs
Position
complement(378090..382397)
Genome browser
AA seq
1435 aa
AA seq
DB search
MARHKDNPTQKKFSKISIGLASPESILAESRGEVLKPETINYRTHKPERDGLFCERIFGP
VKDYECACGKYKRIRYKGIVCDRCGVEVTEKKVRRDRIGHINLVVPVAHIWYFRSLPNKI
GYLLGLPSKKLDMIIYYERYVVIQPGIAKNAEGEEVRNLDFLTEEEYLDILDTLPPENMY
LEDSDPNKFIAKMGAECLIDLLKRIDLDALSYDLRHKANNETSKQRKTEALKRLQVVEAL
KDSNERRENKPEWMVMKVVPVIPPELRPLVPLDGGRFATSDLNDLYRRVIIRNNRLKRLM
EIKAPEVILRNEKRMLQEAVDSLLDNTRKSSAVKTDSNRPLKSLSDSLKGKQGRFRQNLL
GKRVDYSARSVIVVGPELKLYECGIPKDMAAELYKPFVIRKLIERGIVKTVKSAKKIIDK
KEPVVWDILENVLKGHPVMLNRAPTLHRLGIQAFQPKLIEGKAIQLHPLVCTAFNADFDG
DQMAVHLPLGPEAILECQLLMLASHNILNPANGSPIAVPSQDMVLGLYYMTKLRRSEPGH
IVKGEGLTFYGPEELVIAFNEKRVDINAPVKCRINLLQEDGSYKTQIIETTAGRVIFNQK
VPDEAGYINEVLTKKALRDIIGEILKVTDVPRTAAFLDEIKDLGYGFAFRGGLSFSLGDI
MIPVEKQSMIDAANTKVDAIRGNYGMGLITQNERYNQVIDVWTATNAQLTELSMKNIRED
QQGFNSVFMMLDSGARGSKEQIRQLTGMRGLMAKPKKSNDGGGAIIENPILSNFKEGLSI
LEYFISTHGARKGLADTALKTADAGYLTRRLHDVAQDVIVNHEDCETLRGIEVSALKKNE
EVMEKLGARVLGRTALHDVIDPATQEVIIAAGELIVEKIADIIEASDLESVEVRSALTCE
AAKGVCTKCYGRNLATNRLVMRGEAVGVIAAQSIGEPGTQLTLRTFHVGGVAGNVSEDSS
IVAKNDGILEIEDLKTVKGENSEGKPVEVVISRTAESKLLHEKTGMLLNSNNIPYGCELY
VKRGTKVKKGDLLAKWDPFNGVIISEFAGKIKFENIIQGVTFQVESDEQTGYEEKVISDS
RDKKLIPTLHILDSKGDNVISYNLPVGAHLMINDDEKIKVGKVLVKIPRKSAKAGDITGG
LPRVTELFEARNPSNPAVVSEIDGVVSFGKIKRGNREIIVTSKTDEVKKYLVKLSNQILV
QENDYVRAGMPLSDGSITPKDILAIKGPSAVQQYLVNEVQEVYRLQGVKINDKHFEVVVR
QMMRKVRIVDSGDGMFLENQLVHKEDFILQNDRLYGKKVVESAGDSVNLKEGQIITSREL
RDENSILRREDKALATARDVMPATAEPVLQGITRASLQTKSFISAASFQETTKVLNEAAV
AGKVDTLEGLKENVIVGHRIPAGTGMRNYEDIIVGSKEEFEKLLHQKEEPKVNYN
NT seq
4308 nt
NT seq
+upstream
nt +downstream
nt
atggctagacataaagacaacccaacacaaaagaaattttcaaaaatttcaatcggtctt
gcatctccagaatctattcttgctgagtcaagaggtgaggtgttaaaaccagaaacgatt
aactatcgtacgcacaaacctgaaagggatgggcttttttgtgagcgtatattcggtcct
gtaaaggattatgaatgtgcttgtggaaaatataaacgtatacgttataaaggaatcgtt
tgtgaccgatgtggtgtagaggttacagagaaaaaagtaagacgtgatcgtataggacat
atcaatcttgttgtgccagtggcccacatttggtatttccgtagtttgccaaacaaaatt
ggttacctactagggcttccttcaaagaagctggacatgatcatctattacgaaagatat
gtggtgattcaaccaggtatcgcaaagaatgctgaaggcgaagaagttcgtaatttagat
ttccttacagaagaagaatacctagatatcttagatacgcttccaccggaaaacatgtat
ttagaagattcagatcctaacaaattcatcgctaagatgggtgctgagtgtttgatcgat
ttacttaaacgtatcgatttagatgcgctatcatatgacctgagacacaaagcaaataat
gagacgtctaaacaacgtaagactgaagctttaaaacgtctgcaagttgtggaggctctt
aaagattctaatgagcgacgagaaaacaaaccagaatggatggtcatgaaagtggttcca
gtaattccgccagaattacgtccattagtaccacttgacgggggtcgttttgcaacgtct
gatttaaatgatttataccgtcgtgtgatcatacgtaacaaccgtttgaagcgattgatg
gagattaaagctcctgaggttatccttcgtaacgagaaacgtatgttacaggaagcagta
gattcacttcttgataatacaagaaaatctagtgctgtcaagaccgattctaacagacca
ttgaaatccctttctgattccttaaaaggaaagcaaggacgtttccgtcagaacttactt
ggtaagcgtgtagattattctgctcgttcggtaattgttgttggaccagagcttaaatta
tatgagtgtggtatacctaaggacatggctgcagagctttataagccttttgttatccgt
aaactcattgagcgcggtatcgttaagacggtaaagtctgctaagaaaattatagataag
aaggaaccagtggtttgggatattctggaaaacgttctaaaaggacacccagtaatgttg
aaccgtgctcctacacttcacagattaggtatacaagcatttcaacctaaacttattgaa
ggaaaagcgatccagttacacccattagtatgtacggcatttaacgccgattttgatggt
gatcaaatggccgttcaccttccgttaggtcctgaagcaatattagaatgtcagttatta
atgctggcttcacacaatattctgaaccctgcaaacggtagcccaattgcggtaccttct
caggatatggtattgggtctttattatatgaccaaacttcgtagatctgaacctggacac
attgttaaaggtgaaggacttactttttacggacctgaagaattagtaattgcttttaat
gaaaagcgtgtagatattaatgctcctgtaaaatgtagaatcaatcttcttcaagaagac
ggttcttacaaaactcagatcattgaaactactgctggtcgtgtgatttttaatcaaaag
gtgccggatgaagctggatacatcaatgaggtattaactaagaaagctcttagagatatt
atcggagagatattaaaggttacagatgttcctagaacagctgctttccttgatgaaatt
aaagatctaggttatggatttgcatttcgtggtggattatcattctctcttggagatatc
atgatccctgtagaaaagcaatcgatgatcgatgcagcaaacactaaagtggatgcgata
cgtggtaactacggtatgggtcttattacccaaaacgaaagatataatcaagtaattgat
gtgtggactgccactaacgcgcagcttactgaattgtcaatgaaaaacattagagaagac
caacaagggttcaactctgtgtttatgatgcttgattctggagcccgtggatctaaagaa
cagatcagacagcttaccggtatgcgtggacttatggcaaagcctaagaaatccaatgac
ggtggtggtgcaattattgaaaacccaattctttctaactttaaagaaggactttcaatt
cttgaatactttatctcaactcacggtgcacgtaaaggacttgcagataccgcccttaaa
acggcagatgcaggttacttgacacgtcgtttacacgatgttgctcaagatgtgatcgta
aatcatgaagattgtgaaaccttaagaggtattgaagtttctgcattgaagaagaatgaa
gaagtaatggagaaactgggagcgagagttctaggtcgaactgcattacatgacgttatt
gatcctgcgacgcaagaagtaattattgctgctggtgaactgatcgtagaaaaaatcgca
gacatcattgaagcttctgatctggaatcagtagaagtaagatctgctcttacttgtgaa
gctgcaaaaggtgtttgtactaaatgttacggacgtaaccttgctactaaccgtcttgtt
atgagaggtgaagctgtaggtgtaattgctgcgcagtctattggagaaccaggtacacaa
cttaccttgagaactttccacgtaggaggggtagcaggtaacgtatctgaagacagctct
attgttgcaaagaatgacggtattcttgagattgaagatcttaaaacagttaaaggtgaa
aacagtgaaggcaaaccagtagaggtagtaatatctcgtacggcagaatctaaattgcta
cacgaaaaaactggaatgctactgaattcaaataacatcccttacggttgtgagctttat
gtgaagcgaggaactaaggttaaaaaaggagatcttctcgcgaagtgggatccttttaac
ggtgttattatttctgaatttgcaggtaagatcaaatttgaaaatatcatacaaggtgtt
actttccaagtagaaagtgatgaacaaactggatatgaggagaaagtaatttctgactct
agagataagaaattgattcctacgctgcatattttagacagtaaaggagataatgttatt
tcttataacttaccagtaggtgctcacttgatgatcaacgatgatgaaaagatcaaagtt
ggtaaagtattggtaaagattccacgtaaatctgctaaagcaggtgatattactggaggt
cttccacgtgtaacagaattgtttgaagcacgtaatccttctaatcctgctgtagtaagt
gagattgatggtgttgtttctttcggtaaaatcaaacgtggtaaccgtgaaatcatcgtg
acttctaaaactgatgaagtgaagaaatacctagtgaaactatctaatcaaattcttgta
caagaaaatgattatgttagagcgggtatgccattatccgacgggtctattactcctaaa
gatattcttgcaattaaaggaccaagtgctgttcaacagtacttagtaaatgaagttcaa
gaggtgtacagattacaaggtgtaaagattaacgataagcactttgaagttgtagttcgt
caaatgatgagaaaggtaagaatcgttgattctggtgatggtatgttcttagagaatcaa
ttggttcacaaggaagattttatcttgcaaaacgatagactttatggtaagaaagtagtt
gaaagtgctggagattctgtaaacttaaaagagggacaaattattacttctagagagtta
agagatgaaaactctatattacgtagagaagataaagctcttgcaactgctcgtgacgta
atgcctgcaactgctgagccagttcttcaaggtattactcgtgcatcgcttcaaacgaag
tcattcattagtgcagcatctttccaagagacgactaaagtattgaacgaggctgcagta
gcaggtaaagtagatacgttagaaggtcttaaagaaaatgtaattgtaggtcacagaata
cctgcaggtactggaatgcgtaactatgaagatatcatagtaggttctaaagaagagttt
gaaaaacttcttcaccaaaaagaagagcctaaagtaaattataactaa
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