Nonlabens sp. MB-3u-79: CW736_05865
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Entry
CW736_05865 CDS
T05253
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
nob
Nonlabens sp. MB-3u-79
Pathway
nob02020
Two-component system
nob02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
nob00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CW736_05865 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CW736_05865 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nob03021
]
CW736_05865 (rpoN)
Transcription machinery [BR:
nob03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CW736_05865 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_CBD
Sigma54_DBD
Sigma54_AID
HTH_12
LacI
Dam
MarR
Motif
Other DBs
NCBI-ProteinID:
AUC78954
LinkDB
All DBs
Position
1329791..1331251
Genome browser
AA seq
486 aa
AA seq
DB search
MLKQSLNFKLSQKLSPQQIQLMKLIQLPTQAFEQRVKSELEENPALDDGQEKSDDEYDEF
SNEEDYEDGNESIETDDINVDDYLSDDDIPEYRTKANNYSADDDEKSIPYAAGKSFTQTL
LEQLNTRRLSEDHRAIAEFLVGSIDASGYIRRSLEDITDDLAFTMNLYTEVEEVEKVLRV
VHELDPVGVGARDLQECLLLQLSRKRKTESNEIAIKLIRDSFDAFSKKHYAKIMAKYDIT
EDELRDAIDDIEHLNPKPGGSYAGGSSRVVEQVVPDFTIRIKDGELELTLNGRNAPELHV
SRDYSNMLRGYKEAKEKTKSQKDAVMFIKQKLDGAKWFIDAIKQRQETLFVTMSTIMHYQ
QAYFHSGDERNLRPMILKDIADKIDMDVSTVSRVANSKYVDTPYGTKLIKEFFSESMTNT
DGEEVSTREIKKILETVINDESKKKPLTDQKLAELLKEKGYPIARRTVAKYREQLDIPVA
RLRKEI
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgcttaaacagtcactaaattttaaactctctcagaagttatctcctcaacaaatacag
ttgatgaagttgatacaattgcctacacaggcttttgagcaacgagtaaaatcagaactg
gaagaaaacccagccctagatgatggacaggaaaaatctgatgatgagtatgatgagttt
tctaatgaagaagactacgaggacggaaatgagtctattgaaacagacgatattaatgta
gatgattacctgagtgatgacgacattcctgaataccgcacaaaagcaaataattacagc
gcagatgacgatgagaaaagcattccatatgctgctggaaagtccttcacgcaaacctta
ttagagcaactcaacacccgtagattaagtgaagatcatcgagcgattgcagagtttctt
gtggggagtattgatgcgagtggttatataagaagatcgctggaagatataactgatgac
cttgcttttaccatgaacttgtatacagaagtggaagaggtggaaaaagtacttcgggta
gttcatgaattagatcctgtcggggtaggagctcgtgatttgcaagagtgtttgctgtta
cagctttcgcgaaagcggaaaacagaaagtaatgagatcgccataaaattaataagagat
tcgtttgatgcatttagtaagaagcattatgcgaaaatcatggccaaatacgatattacc
gaagatgaattacgcgatgcgatagatgatatagagcatttaaaccccaagcctgggggt
tcttatgcaggcggaagttctcgtgtggtagaacaagtagttcctgatttcactattaga
attaaagatggcgaattggaactcacactcaacggccgtaatgcgccagagttgcatgta
tctagagattattctaatatgttgcgcggttataaagaggctaaagaaaaaaccaaatct
caaaaagatgcggtgatgtttatcaaacaaaaattagatggtgctaaatggtttattgac
gctatcaagcaacgacaagaaactttatttgtgaccatgtctaccattatgcattatcag
caggcttattttcattctggagatgagcgtaatttaagacctatgatcttaaaggatatt
gcagataagattgatatggatgtttctacggtttctcgtgtggcaaattctaaatatgtc
gacaccccttatggaactaaattaatcaaagaattcttttcagaatccatgaccaatacc
gatggtgaggaggtttccactagagagattaagaagattctggagactgttattaatgat
gaaagcaagaaaaagccgcttacagatcaaaaactagctgaacttcttaaggaaaagggc
tatcctatcgctcgtagaacagttgctaagtacagagagcaattagatattccggtggca
cgtttaagaaaagagatttag
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