Nonlabens sp. MB-3u-79: CW736_10465
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Entry
CW736_10465 CDS
T05253
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
nob
Nonlabens sp. MB-3u-79
Pathway
nob03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nob00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CW736_10465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nob03019
]
CW736_10465
03400 DNA repair and recombination proteins [BR:
nob03400
]
CW736_10465
Enzymes [BR:
nob01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CW736_10465
Messenger RNA biogenesis [BR:
nob03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CW736_10465
DNA repair and recombination proteins [BR:
nob03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CW736_10465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
HTH_5
HTH_Crp_2
DUF2513
Motif
Other DBs
NCBI-ProteinID:
AUC79755
UniProt:
A0A2K8XA17
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Position
complement(2374176..2376059)
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AA seq
627 aa
AA seq
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MINKSLDILKTVYGFDLFRPLQQEIISSVLEGKDTLALLPTGGGKSVCYQIPGIQLPGIC
IVISPLVALIKDQVDQLKKRNIKAVGITGGISYQELDDVLDNCIYGNYDFLYMSPERLQQ
ALVKERVLKMNVNLIAIDEAHCISEWGHDFRPAYRQIITLKELHPRVPIIAVTATATKAV
QEDIVTVLELEDARVFKSSYERSNIHYKIENTGDKRQALRHFYNVQPGSSITYVRSRKNA
VEFTLLLQQAQITAGFYHGGLSNKIRSRTAQSWMNNKIQVMVATNAFGMGIDKPDVRSVV
HMQLPDSVESYYQETGRAGRDGADSIAYFIYNRNDIEHAYNQFVKSKPTADYLKLIYRKL
SNYLRIAIGEGEEQTHTLSFSRFCATYELNGMQAYSALNALDRFSVISLAQGYRRRCSVS
FRESGTRIISFAQNRPVANAIIQAILRTYGSSENHVLQINTALIATRSNTSEEEVNETLQ
LLHDQELIEATITNTDLQITYLTPRDDDRTINRFSRELERQNTLRLNKLKSLVQLVTNTT
TCINRMLLEYFDEETDRDCGNCSNCAPIVARTTSEQILIALQNQPLDSQQICKEMNEDKD
VVVAHLKTLLEQRKVLLTSHNKYKINE
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
ttgataaataaatccttagacatattaaaaaccgtttatggttttgacctattcagacct
ttacaacaggaaattatttccagtgtattagaaggtaaggatactcttgccttgttacct
accggtggagggaaatctgtatgttatcaaattcctggaatacaacttcctggtatatgc
atcgttatttcaccactagttgctttgattaaagatcaagtcgatcaacttaaaaagaga
aatatcaaagcggtaggaattactggtggtatctcctatcaagaactggatgatgtactg
gataattgtatttatggaaattatgattttctttacatgagtccagagcgattgcaacaa
gcattagtgaaggagcgtgttcttaaaatgaatgtcaatctaatcgctattgatgaagca
cattgcatcagtgaatggggtcatgattttagacccgcctaccgacagatcattacctta
aaagaattacacccgcgagttcctataattgcggtaacagctacagcaacaaaagcggtg
caagaggacatagtgactgttctggaactagaagatgcacgagtatttaagtctagttat
gagcgttccaacatccattataaaatagaaaatactggagataaacgacaagcactacgc
catttttacaacgttcaacccggtagcagtatcacctatgtaaggagtagaaagaatgcc
gtagaattcaccttactccttcaacaagctcaaattactgcagggttctatcacggtggt
ctttctaataaaatacgatcacgcactgcacaatcctggatgaataataaaatacaggtg
atggtagcgaccaatgcctttggtatgggaatagataagccagatgtgcgtagtgtggtt
cacatgcagttgcccgacagcgttgaaagttactatcaagaaactggaagagctggtcga
gatggcgctgacagtattgcttattttatttacaatcgcaacgatattgaacacgcatac
aatcagtttgtaaaatcaaaacctacagcagattacctcaaattgatctatcgcaaatta
tccaattatttaagaattgccataggtgaaggagaagagcaaacccatacgctatcattt
tcaagattttgcgccacttatgagttaaatggtatgcaagcctacagcgcccttaatgcc
ttagacagatttagtgtcatcagtcttgcacaaggttataggagacgttgcagtgtaagc
tttcgcgaaagcggaacaagaatcatttcctttgcccaaaacagacctgttgctaatgca
attatacaggccatattgcgtacctatggaagcagtgaaaatcacgtattacaaatcaat
actgctttgatcgctacaagaagtaatacgagtgaagaagaagtaaatgaaaccctgcaa
ttgctgcacgatcaagaattgatagaggctactattaccaataccgatttacaaatcacc
tatttaactcctagagatgatgatcgcacgatcaatagattctcaagagaactagaacga
cagaatacgttgcggctgaataaactaaaatcattagtacagctggtaaccaatactaca
acttgtatcaatagaatgctcttggagtattttgacgaagaaacagaccgcgattgtgga
aattgtagtaattgtgcgccgatagtagcgcgtaccacttcagaacaaatccttatcgca
ctacaaaatcagccgcttgatagtcaacagatctgtaaagaaatgaacgaagataaagat
gtggttgtagcacatctcaaaacattactagaacaaagaaaggttcttttaacgagccat
aataaatataaaatcaatgagtaa
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