Nitrosococcus oceani: Noc_0019
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Entry
Noc_0019 CDS
T00281
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
noc
Nitrosococcus oceani
Brite
KEGG Orthology (KO) [BR:
noc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
noc03032
]
Noc_0019
03400 DNA repair and recombination proteins [BR:
noc03400
]
Noc_0019
Enzymes [BR:
noc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Noc_0019
DNA replication proteins [BR:
noc03032
]
Prokaryotic type
DNA Topoisomerases
Noc_0019
DNA repair and recombination proteins [BR:
noc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Noc_0019
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
Motilin_ghrelin
Motif
Other DBs
NCBI-ProteinID:
ABA56561
UniProt:
Q3JF35
LinkDB
All DBs
Position
12438..14861
Genome browser
AA seq
807 aa
AA seq
DB search
MKASTAYDSSHIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGFCNE
ISIIIHSDDSITISDNGRGIPTDIHQEEGRSAAEVIMTVLHAGGKFDHNSYKVSGGLHGV
GVSVVNALSAVLFLEIHRDGKIYQQHYQEGVPQGPLVAVGTTERSGTTIRFSPSPKIFSN
IVFSFDIFAKRLRELAFLNSRVRILLEDERIGRKEEFFYEGGISAFVEHLNKNKTPLHGN
VFYFQGERDGVAVELAMQWNDSYQEHFFCFTNNIPQRDGGTHLAGFRSALTRTLNQYIEK
EALAKKTKVGTTGDDAREGLTAVLSIKAQDPKFSSQTKEKLVSSEVKPVVDSLVSEHFQN
FLLEHPVDAKAIGGKMIEAARAREAARKARELTRRKGALDMAGLPGKLADCQERDPTLSE
LFLVEGDSAGGSAKQGRDRRNQAILPLKGKILNVEKARFDKMLSSVEVATLITALGCGIG
REEYNPDKLRYHRIIIMTDADVDGSHIRTLLLTFFYRQMPELVERGHIYIAQPPLYKVKR
GKQEQYIRDDAEMERYLINLSTDNAKIYSENGATSIAGETLSTLFTDYFQLRRAIERLSY
RYDPLLLDQMLYLDVVPTPADPMIEIKQLEEWATQLEIRSNSAAKGNARYEIEVATVPEN
SAPVLQVKITRHGVTAYQRIYMDFFTSPDYQRIQNLGKRLVNSVKAESYVQRGDRRQLVN
DIQEAVDWLMEEARRGQAVQRYKGLGEMNPDQLWETTMNPATRRLSQVRIDDVITADEIF
TTLMGDHVEPRRDFIESHALSVAHLDV
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atgaaagccagcactgcctacgactcatctcatattaaagttctgaagggcctggatgcc
gttcgtaaacgccctggtatgtatattggtgataccgatgatggcaccggtctccatcat
atggtgttcgaagttgtggataattctatcgacgaggccctggcagggttttgtaatgag
attagcatcattatacattctgatgatagcattactatctctgataacggacggggtatc
ccaaccgatattcaccaagaagaagggcgatctgcagcggaggtcattatgactgtactg
catgctggtgggaaatttgaccataactcctataaagtttctggtgggttacatggggta
ggcgtatcagtcgttaatgctctttctgccgttctttttttagagattcaccgcgacggg
aaaatataccagcagcactaccaagagggtgtcccacaggggcctttagtcgctgtcggt
accacagagcgtagcggtacaacgattcggttttcgccaagtcccaaaattttttccaat
attgtctttagtttcgatatttttgcaaagcgactgcgagaattagcttttcttaattct
agagtccgtattttattggaagatgagcgtatcgggcgaaaagaagagtttttttatgag
ggggggataagtgcttttgtagaacatctcaataaaaataaaactccactccacggaaac
gttttttatttccaaggagaacgtgatggggttgccgtggaacttgcaatgcaatggaat
gattcttatcaggagcattttttttgctttaccaataatattccacaaagagatgggggt
actcacttggctggctttcgatccgccctgactcgaactttgaatcagtatattgagaaa
gaagcattagccaaaaaaaccaaggtcggtacgactggcgatgatgctcgagagggactg
actgcggttctctctataaaagcgcaagatccaaagttttcttctcagactaaggaaaaa
ttagtgtcctctgaggttaaaccagtggttgatagcttagtctcagaacattttcaaaat
tttttgctggagcatcccgttgacgccaaggctattggcggcaagatgatagaggctgct
cgagcccgagaagcagcccgcaaagctagagagttaactcgccggaagggggctttggat
atggcagggttacccggaaaattagcggactgtcaggaacgggatccaactttatctgaa
ttgtttttggtagaaggggattcagcaggtggatctgctaagcaagggcgtgatcgtcga
aaccaagccattcttcctcttaaaggaaagatccttaatgtggagaaagctcgttttgac
aaaatgctgagttctgtagaagtcgctactctcattacggccttagggtgcggtattggc
cgagaagaatataatcccgataaactacggtatcatcggattattatcatgacggacgct
gatgtagatggatcccatatacgcacgctgctattaacttttttttatcgccagatgccg
gagctggtagagcggggtcatatttatattgctcaacctcctctttataaggttaaacgg
ggtaagcaagagcagtatattcgggatgatgccgagatggaacgctatttgattaattta
tctactgacaatgcaaaaatctattccgagaatggagcaacttctatagcaggagaaaca
ctatcgaccttatttactgattatttccagttgaggcgtgctatcgagcgattatcttat
cgttatgatcctttattgcttgatcaaatgttataccttgatgtagtacctacccccgct
gatccaatgatagaaattaagcaattagaggaatgggctacccagttggagattagaagt
aatagcgcagccaaaggaaatgcccgttatgaaattgaagtagccacggtacctgagaat
tctgcacccgtgctccaagtaaagattacgcgccatggggtaaccgcctatcagcgtatt
tatatggatttttttacttccccagactatcaacgcattcaaaatttagggaaacgctta
gttaattccgttaaagcggaaagctacgttcaacgaggtgataggcgacaattagtaaat
gatatccaagaagcagtcgactggttgatggaggaagcaagacggggccaagccgtgcaa
cgctataaaggtcttggggagatgaatccagatcaattatgggaaactacaatgaatcct
gctacacggcgccttagccaggttcgaatcgatgatgttattacggcagatgaaatattt
actactttgatgggagatcatgtggaacctcggcgggactttattgagtcccatgcgcta
agtgtagctcatctcgacgtttaa
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integrated database retrieval system
