Nitrosococcus oceani: Noc_0028
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Entry
Noc_0028 CDS
T00281
Name
(GenBank) Primosomal protein n
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
noc
Nitrosococcus oceani
Pathway
noc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
noc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Noc_0028
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
noc03400
]
Noc_0028
Enzymes [BR:
noc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Noc_0028
DNA repair and recombination proteins [BR:
noc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Noc_0028
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Zn_ribbon_PriA
Helicase_C
AAA_30
Zn_ribbon_6
PriA-like_WH
AAA_19
iSirtuin
Motif
Other DBs
NCBI-ProteinID:
ABA56570
UniProt:
Q3JF26
LinkDB
All DBs
Position
complement(25794..28004)
Genome browser
AA seq
736 aa
AA seq
DB search
MAVPPILRLAIPSPLRRYFDYLPPAKTPYQQLQPGIRLQVPFGRRTLIGILVTIASQSEI
ETSKLRRAQYCLDKTPVVPNSLLQLLTWAASYYHHSPGEVFFSALPQLLRQGKPATSPIY
RQWLLSSKDCTTDATILSRAPRQQQLVELLRYHPEGLTSSQIKAQLGTYQSSLRSLIAKG
WVYSQEKPIYKSIPPSKEHLRHPLNDAQKAAVTTILASQQKFRPFLLEGVTGSGKTEVYL
RAIEEIIAKSRQALVLIPEIGLTPQMVERFHRYLQTPITVLHSALSDRERLAAWLAAYEG
KTPVVIGTRSAIWAPLPRLGIIIIDEEHDSSFKQQEGFHYHARDLAIMRAYQTKIPIILG
SATPSLESLDNVKRQRYHLLQLLQRAGAAQTPRIQLLDVRSRPLEFGLSPPLLAALRYHL
GQGNQALLFLNRRGFAPTLICHECGFAVPCHRCDAYMTVHQHTNRLRCHHCGAEGSLPTS
CPQCRNLLLRPRGLGTEQVEAGLKHFFPEIEIARVDRDTTRRAGTLNKMLDGIHNGKYRL
LIGTQMLAKGHHYPNITLAGILDADQGLFGSDFRAGEHMSQLILQVIGRTGRGNKPGEVL
IQTHHPEHPLLTALVGHGYRHVAEILLEERRQIGFPPYGYLALLRARAVSPDSPMKFLEM
ARSMATAHNLHGVTLLGPVPAPMERRAGRYRAQLLLQGSARAPLQRLLTTWIPTLERLQA
ARKVRWSLDVDPIDLM
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atggcagtacctcctatcctgcgtttagctattccttcccccctgcgacgctactttgat
tatctcccgccagctaaaactccgtaccaacaattgcaaccaggtatacgtttacaagtt
ccttttggcagacgcaccctgatcggtatcttagtaacaatcgcatctcaaagcgagatc
gaaaccagcaaattgagacgagctcaatactgcctggacaaaacccccgtcgttcccaac
tctctgctccagcttcttacttgggccgctagttattaccaccactcccctggagaagtc
tttttttctgctttaccccaacttctacgccaaggaaagcccgccacctctcctatctat
cggcaatggcttttaagctctaaagactgcaccacagatgcgacgattcttagccgcgca
ccccggcaacagcagcttgtggaattattacgctatcacccagagggcttaacttcatcc
caaatcaaggcccaattgggtacctatcagagcagccttcgtagtctaatcgctaagggt
tgggtgtattctcaagagaaacctatctacaagagcatccccccttccaaagagcatctt
agacatccactcaatgacgctcagaaagcggctgttaccactattctcgcatctcagcag
aaatttcggcctttcttactggaaggcgtgacaggcagcggtaaaacagaagtctatcta
cgggccatcgaagagatcattgctaaaagccggcaggctctagtactcattccagagatc
ggattgactccccaaatggtggaacgctttcaccgctatcttcaaactcctatcacagtt
ttgcattccgccctcagtgaccgagagcgtttagccgcctggcttgctgcttacgagggc
aaaactccagtggttatcggtactcgttcagcaatatgggcccctctcccgcggcttgga
ataattattattgatgaagagcacgattcttcctttaaacaacaggaaggatttcactac
catgcccgggatctcgccatcatgcgagcataccaaaccaaaatacccattatattaggc
agtgcaacgccctccttggaaagtctcgataatgtcaagcggcaacgctaccatttatta
caattattacaacgggcaggggcagcacaaacaccgcgaattcagctacttgacgtccgt
tcacgtccgttagagtttggactttctcctcctctgcttgcagcattgaggtatcactta
ggacagggaaatcaggctctgctatttcttaaccggcgtggtttcgctcccactttaatc
tgtcatgaatgtggctttgccgtgccttgccaccgctgtgacgcttacatgactgttcat
caacatactaaccgattacgttgccaccactgtggggcagaaggctccctgcccacctcc
tgccctcagtgtagaaatcttcttttgcgtccccggggattaggtacagaacaggtggaa
gcaggcctcaagcatttttttccagagattgagattgcgcgtgtcgacagggataccacc
cgtcgggcaggcaccttgaataaaatgctcgatggtatccataatggaaaataccgtctc
ctgattggaactcagatgttagcaaaagggcaccactaccccaatatcactttggcggga
attctggacgccgaccaaggtctgtttggcagtgattttcgggctggggagcatatgtct
cagcttattctccaggtaataggacggactggccggggtaataagcctggcgaagtattg
atccaaacgcatcaccctgagcatcccttactaacggcgctagtaggccatgggtatcgg
cacgtagccgagatactcttggaagaacgccgccaaattggctttcctccctatggttac
ctcgctctacttcgtgccagggctgtatcccctgactctcccatgaaattccttgaaatg
gcgcggagcatggctacggcgcataatctccatggcgtgaccttgctaggacccgtgcct
gctcccatggagcgccgagccggccgctaccgcgcccagcttttactccagggaagcgct
cgtgctccgctgcaacgattattgaccacatggatacccacgctagaacgtctccaagca
gcacggaaggtacgatggtcattagatgtggaccctatcgatctcatgtag
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