Nitrosococcus oceani: Noc_0063
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Entry
Noc_0063 CDS
T00281
Name
(GenBank) Type III restriction enzyme, res subunit
Organism
noc
Nitrosococcus oceani
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Gene cluster
GFIT
Motif
Pfam:
Helicase_C
SNF2-rel_dom
ResIII
DEAD
AAA_19
PSK_trans_fac
Amidase_3
Motif
Other DBs
NCBI-ProteinID:
ABA56605
UniProt:
Q3JEZ1
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Position
64658..67546
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AA seq
962 aa
AA seq
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MPWQYSTVHNSACKVIEEQTLWGQAVCRIWLPNQDAVVRVPRSALRPLSADLQPEIEAGR
IAYVAAAAKVAEVLEGSTSATDGHVLLAPMESNVIPLPHQIHALSRAISGDRVRYLLADE
VGLGKTIEAGLVMRELKLRGLVRRILVVSPKGIATQWVAEMQTHFNEQFQLVLGDDISTL
QRLAPGADHRNSAWSMFDQVIVPLDSVKPMDKRRGWTAGRVAEYNRSRFEDLITAGWDLV
VVDEAHRLGGSTDQVARYKLGKGLAEAAPYVLLLSATPHQGKTDAFHRLMNLLDEDAFPD
MDSVSRDRVAPYVIRTEKRKAIDADGKPLFKARRTQMAPVVWESRHHLQQLLYEAVTDYV
REGYNQALREKKRHIGFLMILMQRLVVSSTRAIRTTLERRLAALKEGEQQASLRLAELEN
SAGGSENTDDEITELYDMDGQELLDELLKSHVLALQSEGSHVETLLDAAVRCEQAGPDAK
AEALIEWIYELQAEENEPDLKVLIFTEFVPTQEMLKEFLEARGISVVTLNGSMDMEVRGA
AQDTFRKSHRVLLSTDAGGEGLNLQFAHVIINYDIPWNPMRLEQRIGRVDRIGQPKMVRA
INFVFEDSVEFRVREVLEQKLSVIFDEFGIDKTGDVLDSAQAGELFEDVFAQAFANPDGI
ETSVDQTVTRIRDEIQQVRESSAIYGISEELNVQAAEQLRSHPLPHWVERMTVGYLNSHG
GTASRKRSWWDLNWPDGQEHRKAVFNAREADRLTDATLLNLENSRVRGLALNLPQIAAGQ
PLPCVSVSGLPTSISGLWGLFEIRLQAGMHQKTQLLRIPMVRRGYVSVFLSEEGKLFLPT
ARHIWDALQTAEAQVQATLGRDESITAHERLRIAAEQAGQELFDALQQVHLAAVAYEEER
GIVSFASRRKAIERVGLPEVRQFRLARCDAEESEWRHELQSARQIVPEIRSLLMLRIIKR
GA
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
atgccttggcaatacagcaccgttcataacagcgcctgtaaggtcatcgaagaacagacc
ttatgggggcaggccgtgtgccgtatctggttgccgaaccaggacgcggtggtgcgcgtg
ccccgctccgccttacggccgctgagtgccgacctgcaaccggagatcgaggctggacgc
attgcctatgtggccgccgcagccaaggtggccgaggtgctcgaaggctccaccagcgcc
actgacggtcatgtattgctggctcccatggagtccaatgttatcccgctgccgcaccag
atccacgccttgtcccgggctatctccggcgaccgtgtgcgctacctgttggccgacgag
gtgggcctcggcaagaccatcgaggccggtctagtcatgcgcgagctcaagctgcgcgga
ctggttcggcgaatcctggtcgtctctcccaaaggcatcgctacccagtgggtggcggaa
atgcagacccacttcaatgagcagttccagctcgtgctgggtgatgacatcagcaccttg
cagcgcctggccccaggggcggaccaccggaactcagcctggtcgatgttcgatcaggtc
atcgttcccctggattcggtcaagcccatggacaagcggcggggttggaccgccgggcgc
gttgccgaatacaatcgcagccggttcgaggatctgatcactgctggttgggatctggta
gtggtggacgaagcgcaccgcctgggtggcagtaccgatcaggtcgcccgctataagctc
ggcaagggcctggcggaggccgcgccctatgtactgctcctttcggctacgccccaccag
gggaagaccgatgctttccatcgcttgatgaacctgctggatgaggacgccttcccggat
atggacagcgtttcccgcgaccgggtggctccttacgtcatccgcacggaaaaacggaag
gccatcgatgccgatggcaagcccctcttcaaagcccggcgcacgcagatggccccggta
gtctgggagagccgtcatcacctgcagcagctcctctatgaggcggtgaccgactatgtg
cgcgagggctacaaccaggctctgcgcgagaagaagcgccacatcggctttctgatgatc
ctgatgcagcgcctggtggtctctagcacccgagcaatccgcaccactttggagcgtcgg
ctcgcggcacttaaggaaggcgagcagcaagccagcctgcgcctagcggagctggaaaac
agtgcggggggatcggaaaacacagacgatgaaataaccgagctctacgacatggacggc
caggagttgctcgatgaactgctgaaatcccatgtgttggctctacagagcgaaggcagt
catgtggagactttgctagatgcggcggttcgctgcgagcaggcggggccggacgccaag
gccgaggcgttgatcgagtggatctacgagttgcaagccgaggaaaacgagccggatctg
aaagtgttgatcttcactgagttcgtaccgacccaggagatgctgaaggagtttctggaa
gcccggggaatctcggtggtcaccctgaacggctccatggatatggaggtacgtggggca
gcccaggataccttccgtaaatcgcaccgcgtgctgctttccaccgatgcgggcggtgag
ggtctaaacttgcagttcgcccatgtcatcatcaactacgacatcccctggaacccgatg
cggttggagcagcgaatcggccgcgtggaccgtatcggccagcccaagatggtgcgagcg
atcaacttcgtgtttgaagattcggtcgagtttcgcgttcgcgaagtgttggaacagaag
ctctcggtgatctttgacgagttcggcatcgataagactggtgacgtgcttgactcagct
caggccggcgagttgttcgaggatgtgttcgcgcaggcgttcgccaaccctgatggtatt
gaaacttccgtcgatcagacggtgactcggattcgcgatgagattcagcaggtgcgggag
tcctccgccatctatggcatttccgaagaactgaatgtgcaggcggctgagcagctgcgc
tcccatccgctgccccactgggtggagcggatgacggtgggctatctcaattcccacggc
ggcacagccagccgtaaacgctcctggtgggatctaaattggccggacggtcaggagcat
cgcaaggccgtgttcaatgcccgggaagcggaccggctgaccgatgcaaccctgctcaat
cttgaaaacagccgtgtccgtgggctggccttgaacctgccgcagatcgcggcgggccag
ccattgccttgcgtaagcgtgagcggtctgccaaccagcatctccggtctctggggactc
tttgagatccgccttcaggccggaatgcaccagaagacacaactcctgcgcatccccatg
gtgcggcgcggttatgtcagcgtgttcctgagcgaggaaggcaaactgtttctgcccacg
gcccggcatatctgggatgcgctgcagacagcggaagcccaggtgcaagccaccctcggg
cgagatgaatccatcaccgcccatgagcgtttgcggattgctgccgaacaggccggacag
gagctgtttgacgccttgcagcaggtacatcttgccgctgtggcttacgaggaggaacgc
ggaattgtctcctttgcctcgcgccgcaaggccatcgaacgggttggattgccggaggtg
cggcaattcaggctggcccgttgcgacgcagaagaatccgaatggcgacatgaactgcaa
tcggcgcggcagatcgtgccggaaatccggtcgctgctgatgctgcggattatcaaaaga
ggcgcttaa
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