KEGG   Nitrosococcus oceani: Noc_0115
Entry
Noc_0115          CDS       T00281                                 
Name
(GenBank) ABC transporter, transmembrane region
  KO
K06147  ATP-binding cassette, subfamily B, bacterial
Organism
noc  Nitrosococcus oceani
Brite
KEGG Orthology (KO) [BR:noc00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:noc02000]
    Noc_0115
Transporters [BR:noc02000]
 ABC transporters, eukaryotic type
  ABCB (MDR/TAP) subfamily
   ABCB-BAC subgroup
    Noc_0115
SSDB
Motif
Pfam: ABC_membrane ABC_tran SMC_N AAA_16 AAA_22 Zeta_toxin AAA_29 RsgA_GTPase ABC_ATPase DUF87 AAA FtsK_SpoIIIE AAA_21 AAA_30 MMR_HSR1 AAA_25
Other DBs
NCBI-ProteinID: ABA56648
UniProt: Q3JEU8
LinkDB
Position
complement(121067..122944)
AA seq 625 aa
MSSGNFHGPYLRLQDFVAYSDRYILLTSTTHSVQALARLLRYAKGYRRRILAATACSIIN
KLFDIAPEILIGVAIDVVVNKEDSFVARLNFTTPEEQILVLAILTFFIWVGESLFEYLYK
ILWRNLAQRLQADLRQDTYEHVQQLDMSFFESKSSGHLVAIMNDDVNQLERFLDGGANAL
IQVGVAVIAVGAVFFILSPLIALLAFTPVPLIIWGAFFFQRKAGPLYNDVREKVGDLASR
LGNNLSGIATIKSFTAEAREAERLKAVSETYVEANRRAIRVSSAFIPVIRMAILVGFLAT
FTIGGMMALQGSLNVGAYGVLVFLTQRLLWPLTGLAEVIDLFERAMASTRRILDLLEVTV
EVQDVSNRSLATPVRGEVHFQGVSFRYASSGAGVENINLSVPGGSTLALVGATGSGKSTL
IKLLLRFYDPHEGQVCIDGQPVREISLYSLRQAIGLVSQEVYLFEGSIRNNIAYGRPDAD
EESIIKAAITAEAWNFIHALPQGLDTPVGERGVRLSGGQRQRLSLARALIKNPPILVLDE
ATSAVDNETEAAIQRSLQRIGHDRTVIMIAHRLSTIVYADRIVVIHQGRVIEHGTHAELL
EANGRYAAQWRVQTGLAKAEDTLLG
NT seq 1878 nt   +upstreamnt  +downstreamnt
atgtctagtggcaattttcacggcccttatcttcgacttcaagactttgtggcctattcg
gacagatatatcttgctaacttcgaccacccacagtgttcaagcattggcgcgtttgctg
cgttatgctaaaggttatcgtcggcgaattctggcggctactgcctgctcaatcattaac
aagctattcgatatcgccccggaaatattgattggggtggctatcgatgtagtcgtcaat
aaagaagacagttttgtcgctcggttgaacttcactacgcctgaagaacaaattctagta
ttggcaatactcaccttttttatttgggtaggagagtcgctgtttgaatacctctacaag
attctgtggcgcaacctagctcagcggttgcaggcggatctgcgccaggacacttatgaa
catgtccaacagctggatatgagttttttcgagtcgaagagttccggccacctggtggca
atcatgaacgatgacgtcaaccagcttgagcgctttctggatggaggcgctaatgcccta
atccaggtaggggtagcagtgatagcggtaggtgcagtgttcttcatcttatcaccgctg
atcgcactgctcgctttcaccccggttccgctgattatttggggcgctttcttctttcag
cgcaaggccggtcccctctacaatgatgtgcgcgagaaggttggcgacttagcaagccgc
ctgggcaacaatttgagtggcattgccactatcaagagttttaccgccgaggcacgtgag
gccgagcgcctgaaagcagtcagtgaaacctatgtagaagccaatcgcagggcgattcgg
gtgagttcagcatttatcccggtaattcgcatggctattctggttggctttctggccacc
ttcactatcggcggtatgatggcgttgcagggcagtcttaatgtaggtgcctatggcgtc
ctagtgtttctaacgcaacgtctgctgtggccgctaaccggcttggccgaggttattgat
cttttcgagcgggccatggccagcacacggcgcattctcgatctactggaagtaacagta
gaagtgcaggatgtcagcaatcgctctcttgcgaccccagttcgcggggaagtccacttc
cagggcgttagctttcgttacgcgagcagcggtgccggcgtggagaacatcaatctatct
gtgccagggggcagtaccttggccctagtgggggcaacgggatcaggcaaatcgaccctg
atcaagctactactgcgtttctatgatccccatgagggacaagtatgcattgatggccag
ccggttagggagatcagtttatactctctgcgccaagccatcggcctagttagccaagag
gtttatctgtttgaaggcagtatccgcaacaatatcgcctacggacgtcccgatgccgac
gaggagtcgatcatcaaggctgctatcactgccgaagcttggaacttcatccatgcgctg
ccgcaggggctagataccccggtgggtgagcgcggcgtgcgcctctctggcggtcagcgc
cagcgcttgtccttggcccgggctttaattaaaaatccgcccatcctggtgctggatgag
gctaccagcgccgtcgataatgaaaccgaggcagctatccagcgttcacttcagcgtatt
ggccatgaccgaacggtgattatgatcgcccaccgactatcaaccatcgtatacgccgac
cggatcgtagtgattcatcaaggtcgggtcatcgaacatggtacccatgctgagctgctt
gaagctaatggccgctatgctgcccagtggcgtgtacaaaccggcttagctaaagccgaa
gatacgctgctgggatga

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