Nitrosococcus oceani: Noc_0115
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Entry
Noc_0115 CDS
T00281
Name
(GenBank) ABC transporter, transmembrane region
KO
K06147
ATP-binding cassette, subfamily B, bacterial
Organism
noc
Nitrosococcus oceani
Brite
KEGG Orthology (KO) [BR:
noc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
noc02000
]
Noc_0115
Transporters [BR:
noc02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
Noc_0115
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_22
Zeta_toxin
AAA_29
RsgA_GTPase
ABC_ATPase
DUF87
AAA
FtsK_SpoIIIE
AAA_21
AAA_30
MMR_HSR1
AAA_25
Motif
Other DBs
NCBI-ProteinID:
ABA56648
UniProt:
Q3JEU8
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All DBs
Position
complement(121067..122944)
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AA seq
625 aa
AA seq
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MSSGNFHGPYLRLQDFVAYSDRYILLTSTTHSVQALARLLRYAKGYRRRILAATACSIIN
KLFDIAPEILIGVAIDVVVNKEDSFVARLNFTTPEEQILVLAILTFFIWVGESLFEYLYK
ILWRNLAQRLQADLRQDTYEHVQQLDMSFFESKSSGHLVAIMNDDVNQLERFLDGGANAL
IQVGVAVIAVGAVFFILSPLIALLAFTPVPLIIWGAFFFQRKAGPLYNDVREKVGDLASR
LGNNLSGIATIKSFTAEAREAERLKAVSETYVEANRRAIRVSSAFIPVIRMAILVGFLAT
FTIGGMMALQGSLNVGAYGVLVFLTQRLLWPLTGLAEVIDLFERAMASTRRILDLLEVTV
EVQDVSNRSLATPVRGEVHFQGVSFRYASSGAGVENINLSVPGGSTLALVGATGSGKSTL
IKLLLRFYDPHEGQVCIDGQPVREISLYSLRQAIGLVSQEVYLFEGSIRNNIAYGRPDAD
EESIIKAAITAEAWNFIHALPQGLDTPVGERGVRLSGGQRQRLSLARALIKNPPILVLDE
ATSAVDNETEAAIQRSLQRIGHDRTVIMIAHRLSTIVYADRIVVIHQGRVIEHGTHAELL
EANGRYAAQWRVQTGLAKAEDTLLG
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgtctagtggcaattttcacggcccttatcttcgacttcaagactttgtggcctattcg
gacagatatatcttgctaacttcgaccacccacagtgttcaagcattggcgcgtttgctg
cgttatgctaaaggttatcgtcggcgaattctggcggctactgcctgctcaatcattaac
aagctattcgatatcgccccggaaatattgattggggtggctatcgatgtagtcgtcaat
aaagaagacagttttgtcgctcggttgaacttcactacgcctgaagaacaaattctagta
ttggcaatactcaccttttttatttgggtaggagagtcgctgtttgaatacctctacaag
attctgtggcgcaacctagctcagcggttgcaggcggatctgcgccaggacacttatgaa
catgtccaacagctggatatgagttttttcgagtcgaagagttccggccacctggtggca
atcatgaacgatgacgtcaaccagcttgagcgctttctggatggaggcgctaatgcccta
atccaggtaggggtagcagtgatagcggtaggtgcagtgttcttcatcttatcaccgctg
atcgcactgctcgctttcaccccggttccgctgattatttggggcgctttcttctttcag
cgcaaggccggtcccctctacaatgatgtgcgcgagaaggttggcgacttagcaagccgc
ctgggcaacaatttgagtggcattgccactatcaagagttttaccgccgaggcacgtgag
gccgagcgcctgaaagcagtcagtgaaacctatgtagaagccaatcgcagggcgattcgg
gtgagttcagcatttatcccggtaattcgcatggctattctggttggctttctggccacc
ttcactatcggcggtatgatggcgttgcagggcagtcttaatgtaggtgcctatggcgtc
ctagtgtttctaacgcaacgtctgctgtggccgctaaccggcttggccgaggttattgat
cttttcgagcgggccatggccagcacacggcgcattctcgatctactggaagtaacagta
gaagtgcaggatgtcagcaatcgctctcttgcgaccccagttcgcggggaagtccacttc
cagggcgttagctttcgttacgcgagcagcggtgccggcgtggagaacatcaatctatct
gtgccagggggcagtaccttggccctagtgggggcaacgggatcaggcaaatcgaccctg
atcaagctactactgcgtttctatgatccccatgagggacaagtatgcattgatggccag
ccggttagggagatcagtttatactctctgcgccaagccatcggcctagttagccaagag
gtttatctgtttgaaggcagtatccgcaacaatatcgcctacggacgtcccgatgccgac
gaggagtcgatcatcaaggctgctatcactgccgaagcttggaacttcatccatgcgctg
ccgcaggggctagataccccggtgggtgagcgcggcgtgcgcctctctggcggtcagcgc
cagcgcttgtccttggcccgggctttaattaaaaatccgcccatcctggtgctggatgag
gctaccagcgccgtcgataatgaaaccgaggcagctatccagcgttcacttcagcgtatt
ggccatgaccgaacggtgattatgatcgcccaccgactatcaaccatcgtatacgccgac
cggatcgtagtgattcatcaaggtcgggtcatcgaacatggtacccatgctgagctgctt
gaagctaatggccgctatgctgcccagtggcgtgtacaaaccggcttagctaaagccgaa
gatacgctgctgggatga
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