Nitrosococcus oceani: Noc_0225
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Entry
Noc_0225 CDS
T00281
Name
(GenBank) DNA replication and repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
noc
Nitrosococcus oceani
Brite
KEGG Orthology (KO) [BR:
noc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
noc03400
]
Noc_0225
DNA repair and recombination proteins [BR:
noc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Noc_0225
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
Lon_C
ChlI
DnaB_C
AAA_16
PAXNEB
AAA_22
Rad51
AAA_24
DUF7125
ABC_tran
RecA
AAA_30
AAA
AAA_14
SLFN-g3_helicase
nSTAND3
GvpD_P-loop
AAA_28
AAA_19
Zeta_toxin
divDNAB
NTPase_1
NACHT
DAP3
Motif
Other DBs
NCBI-ProteinID:
ABA56755
UniProt:
Q3JEJ1
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All DBs
Position
247958..249328
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AA seq
456 aa
AA seq
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MGKPKTVYQCTQCGAESARWAGQCAGCGAWNSLEEQLSAELPKRTGRYAHYAGALSTVQP
LAEVQVTGEVRLSTGLSELDRVLGGGLVTGSVVLIGGAPGIGKSTLLLQALAKMGAVQEG
KVLYLTGEESLAQISLRAQRLGLGAAPVRLLADTLVERALAVARQERPQVMVVDSIQTLY
TEQLQSAPGTVTQVRESAGQLLRFAKQGGTGVILVGHVTKEGALAGPRVLEHMVDTVLYF
EGDGGERLRVLRAAKNRFGAVNELGVFAMTEQGLRGVTNPSAIFLSRGKEAVPGSAVTVI
REGSRPLLVEVQALVDDSHLANPRRVTVGLEPNRLAMLLAILHRHGAVMPGAQDVFINVV
GGVRVNETGADLAVLAAIVSSLRDRPLDQELVLFGEVGLTGEIRPVPGGEERLAAAAKHG
FKKAILPRGNTPRRPVENIAIVPVNRLAEVLEALKE
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaacctaaaactgtttaccaatgcactcagtgcggtgctgaatcggctcgttgg
gctggccaatgtgctggctgcggcgcttggaatagcctggaggagcagctaagcgccgag
ttgccgaaacggactggacgttatgcccactacgccggtgcgttgagcacggtgcagccc
ttggcggaggtacaagtaaccggtgaggtgcgcttatcaacgggcctatccgaattggat
cgagtcttaggcggaggattggtgacgggttcggtggtgctgattgggggcgcaccgggg
attggtaaatccaccttgttattacaggccctggctaaaatgggcgcagtccaagaaggt
aaagtgttgtatttaaccggagaggaatccctggcgcaaattagccttagagctcagcgc
ctgggtttgggagcggcgccggtacggctattagccgacaccctggtggagcgggcctta
gccgttgcccggcaagaacggccccaggtgatggtagtggactctatccagactttatat
acggagcagctgcaatcggcgccgggtacggtgactcaagtgcgggaaagtgctggtcag
ttgctgcgttttgccaagcaaggcgggaccggagtcatccttgtgggccatgtgactaag
gagggcgccctggctggtccccgagttttggaacatatggtggatacggtgctttacttc
gagggagatggaggagaacgcctccgggtgttgcgggcagctaagaatcgctttggcgcg
gtgaatgagctgggagttttcgctatgaccgagcaggggctgcggggcgtcactaatccc
tccgccatctttctttctcgggggaaagaagcggttcctggaagcgccgtcaccgtgatc
cgggaaggaagccgtcctttgctggtagaggttcaggccctggtggatgatagccatctt
gccaatccccgccgggttacggtgggcctagagcccaaccggttagccatgttgcttgcc
attcttcaccgccatggcgcggttatgccaggggctcaggatgtttttataaacgtggta
gggggagtgcgggtgaatgaaacaggcgctgatctagcggttctcgccgccattgtttcc
agcttgcgggatcgcccgttagaccaggaattagtgttgtttggagaggtaggattgacg
ggagaaatccgtcccgtgccggggggggaagaacgtctggcggctgccgctaaacatggt
tttaaaaaggcgattttgcctcggggaaataccccgagacggccagtcgagaatatcgct
attgttcctgtaaaccgtcttgctgaagtactggaggccctcaaagaataa
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