KEGG   Nitrosococcus oceani: Noc_0537
Entry
Noc_0537          CDS       T00281                                 
Name
(GenBank) Sigma-54 specific transcriptional regulator, Fis-type
  KO
K07713  two-component system, NtrC family, response regulator HydG
Organism
noc  Nitrosococcus oceani
Pathway
noc02020  Two-component system
Brite
KEGG Orthology (KO) [BR:noc00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    Noc_0537
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:noc02022]
    Noc_0537
Two-component system [BR:noc02022]
 NtrC family
  HydH-HydG (metal tolerance)
   Noc_0537
SSDB
Motif
Pfam: Sigma54_activat Sigma54_activ_2 HTH_8 AAA_5 AAA_2 AAA Mg_chelatase HTH_30 AAA_16 HTH_50 HTH_28 AAA_22 AAA_19 HTH_23 AAA_7 Xre-like-HTH I-TevI_DNA-bd
Other DBs
NCBI-ProteinID: ABA57057
UniProt: Q3JDN9
LinkDB
Position
complement(575344..576315)
AA seq 323 aa
MDGFDSLIGKAPAFEALLRSARMVAATEVTALIIGETGTGKELLAQAIHAESQRANKAFA
AINCAALPEGLAESELFGHRRGAFSGAVHDHLGRFRAAEGGTVFLDEVNELSPAVQAKLL
RFLESGECQAIGDTRVQHCDVRVIAATNCNLNQRIQEGRFRQDLYYRLHVVPLEIPPLRA
REGDIHKLLKHFCAVFAQQHHGLTPAGFNAAALRALNLYSWPGNVRELRNFCERMMVLLP
GQIITPQNLPFNIRGDLNLPPEKGEKPLITLPESGLELDRVEMELIHQAIAKTKGNRAKA
ARLLGISRDTLCYRLQKYTLQTN
NT seq 972 nt   +upstreamnt  +downstreamnt
atggatgggtttgattcactgattggtaaagcgccggctttcgaggcccttttgcgcagt
gcgcgcatggtggcggccacagaggtgaccgcactcattataggagagacgggtacaggt
aaagagctattggcacaggccattcatgccgagagccagcgggcaaacaaagcatttgca
gccattaactgtgcggcactgccggaagggctagccgaatcggaactttttggccatcgc
cgcggcgctttctctggcgccgtccatgatcatttgggacgtttccgggctgctgaaggg
ggcactgtattcctggatgaagtcaacgagctctcccccgcggttcaggccaagctgctc
cgcttcctggaatctggcgaatgccaggccattggcgatacgcgggtccagcactgcgat
gtgcgggttatcgccgccaccaattgcaatctaaaccaacgaatccaggaaggacggttt
cgccaggatctctactatcgtctccatgtggtgcccctggaaataccgcccttgcgggca
cgggaaggagatatccataagcttttaaagcacttttgcgccgtctttgcccagcaacac
cacggccttacgcccgcgggctttaatgccgctgccttacgggctctcaacctctattcc
tggcccggcaatgtgcgggaattgcgtaatttttgcgagcgcatgatggtgctgttacct
ggccaaatcattaccccccagaatctgccctttaacatccgcggcgacttaaacctgccg
ccagaaaagggggaaaaaccactgatcaccttgccagaaagcggtctagaactcgatcgg
gtagagatggagctcattcaccaagccatcgccaaaactaagggtaatcgcgctaaagcc
gcgcggctgttgggtattagccgcgatacgctctgttaccggctgcagaaatacaccctt
caaaccaattaa

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