Nitrosococcus oceani: Noc_0541
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Entry
Noc_0541 CDS
T00281
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
noc
Nitrosococcus oceani
Brite
KEGG Orthology (KO) [BR:
noc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
noc02000
]
Noc_0541
Transporters [BR:
noc02000
]
Other transporters
Pores ion channels [TC:
1
]
Noc_0541
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
ABA57061
UniProt:
Q3JDN5
LinkDB
All DBs
Position
580106..582262
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AA seq
718 aa
AA seq
DB search
MLKRTPIFVLVATACAASPLLAQDEEVTLPELEVVGQPVERAGVEAENKPFATPDTADLL
RRVPGANVNANGPIAGMVQYRGMFGPRMNVRINGTPIESGGPNWMDPPLSYAPRSLVESI
EVTRGVGSVSTGSGIGGYVEAKTKSSHFTGSEQFEFHSDVDIAGHSVDGGYNLGGILSLS
NDRHRLHFLGSRDDGGDTEFGDGTIKATEYERNTYGAGYGFKTGDHEFSADYQRLDTENS
GTPSLPMDISFIRTNRAGGKYTGFWNDIQLETRFGYSDVDHQMNNFRLRQAANFCALPAP
FCQGDDKRLVNAGSEDFNYGLKATFALWGGDLAIGADGHAAQHNATVLDPDFAPFFVTNF
NNAQINKYGFFSEWTKEIYSNWELQLGARYDRVEMDADGVNAFPAQLADRGMGGMPAQMI
QMLRNRFNGADRGQNNNNVDWVAELSYQMNSALRWTFGAARKMRSPTYIQRYLWIPLEVN
AGLGDGNAYVGNVALDPETSHELGFGFDWQTQAAYFSPQAYYRRVDDYIQGTPAADPVVI
AVSTNAAGDATPLQFSNVDAEIYGLDADFGYRFHPRWRLDGVASYVRGKRRDINDNLYRI
APPNLRLSLTHERIHWFTTVESVLVYRQENISDTNTLDPGNANNTNEATPGYVLVNLYGQ
YRLLNQGITFTAGINNLLDKTYTNHLTGFNRVLNSDVSQGRRLPGPGRNFYAALRYEF
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgcttaaaagaacgcccattttcgtcctcgtagctaccgcctgcgctgcctccccgttg
cttgcccaggatgaagaggtgaccttgccggagcttgaggtggtgggacaaccggttgag
cgtgcgggggtagaagcagaaaataagcctttcgccacgcctgatacggccgatttgctg
aggcgggtccctggcgctaatgtcaatgcgaatggaccgatagcaggtatggtgcaatac
cgggggatgtttgggccgcgaatgaacgtgcggataaatggtacgcctattgaatcagga
ggacctaattggatggacccgccactgagctacgcgcctcgcagcctggtagagtcaata
gaggttacccggggggttgggtcggtcagtacgggttctggaatcggcggctatgttgaa
gccaaaaccaagtccagccattttaccggcagcgagcaatttgaatttcacagcgatgtt
gatatagcaggccattccgtcgatggtggttataatttggggggtattttgtctttgtcc
aatgatcgtcatcggttacattttcttggtagccgggatgatggtggcgatactgaattt
ggcgacggcactatcaaggccaccgagtacgaacggaatacttatggcgctgggtacggt
tttaaaacaggcgatcatgaatttagcgctgactatcaacgtctggataccgagaatagt
ggcaccccaagcctgcctatggatattagcttcatcaggaccaatcgggcaggaggtaaa
tatacggggttttggaacgatatccagctagaaacccggttcggctattctgatgtggat
catcaaatgaataattttaggttgcggcaagccgctaatttttgcgctctaccggccccc
ttttgccagggcgatgataaacgtttggtgaatgctggcagtgaagatttcaactacggc
cttaaggccaccttcgccctctggggtggcgatctagccataggcgccgatggccatgcc
gcgcagcacaacgcgactgtcttggatcctgattttgcgccctttttcgtgactaatttt
aacaatgcgcaaataaataagtatggcttctttagtgaatggaccaaggagatttattct
aactgggaactccagcttggagcccgttatgatcgggtagagatggatgcggatggggtc
aacgcctttcccgctcagcttgccgacaggggcatgggggggatgccggcgcagatgata
caaatgctcaggaatcgattcaatggcgccgatcgtgggcaaaacaacaacaatgtggac
tgggtcgccgagctcagctaccaaatgaattccgctcttcgctggactttcggcgcggcg
cggaagatgcgctcgccaacttacattcaacgttatctctggattcccctggaagtcaat
gcgggtcttggggacgggaatgcctatgtgggtaatgtagcgcttgatccggagacttcc
catgaattgggatttggctttgattggcagactcaggctgcctacttttcgccgcaagcc
tactaccgccgggtcgatgattatattcaagggactccagccgccgatcccgtggtgatt
gcagtcagcaccaatgctgctggggacgccaccccccttcaatttagcaatgtggatgct
gaaatttacggccttgatgctgattttggctaccgcttccatccccgatggcggctggat
ggggtggcgagttatgtccgaggtaaacggcgggatattaatgataacctgtatcgtatt
gctccgcccaatttgcgtctttccctgactcatgagcggattcattggtttaccaccgtt
gaaagcgtgctagtttatcggcaggaaaatatttcagatactaatactttggacccggga
aacgccaacaatacaaatgaagcgactccaggctatgtcctggttaatctttatggacaa
taccggttgcttaatcaaggcattaccttcaccgcgggaatcaataacttgctcgacaaa
acgtatactaaccacctaacgggctttaaccgggtgctcaatagcgatgtctcccaagga
cggcgtttacctggacctggacgcaacttctatgctgctttgcgttatgagttttag
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