Nitrosococcus oceani: Noc_0602
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Entry
Noc_0602 CDS
T00281
Name
(GenBank) MscS Mechanosensitive ion channel
KO
K22044
moderate conductance mechanosensitive channel
Organism
noc
Nitrosococcus oceani
Brite
KEGG Orthology (KO) [BR:
noc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
noc02000
]
Noc_0602
Transporters [BR:
noc02000
]
Other transporters
Pores ion channels [TC:
1
]
Noc_0602
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Gene cluster
GFIT
Motif
Pfam:
MS_channel_2nd
MS_channel_3rd
MS_channel_1st
DUF6785
Plasmodium_Vir
Motif
Other DBs
NCBI-ProteinID:
ABA57121
UniProt:
Q3JDH5
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Position
complement(649043..650749)
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AA seq
568 aa
AA seq
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MANWRALLLFLAIFIAGNTHAEETLTPQENTTKNSASPTITAVKPNPVPGAQQRQWIKLI
GEGFNAKSKVMLRLRERIFPIPPERTRFISSKILEIYVNVSTGPATWQAQVSNSEGQKTK
PFSFEVKPPAAIASQPQEVEERGRKAEVEALEKKAEETDKKIEQVKETAEAAKLEAAQTA
LKKATVQQQVEKTAQAARAAQQQLEAAKAKAQATGDAADQKEVEKLAEEAEKRKQATAAE
ESRLAAIEAKEQAAKEKTTATETEIEKLQQEFAELRKQRAAKRTFLEQATTAAWIILAGF
IIWFIKRLAVNKFESVTVKREEVREGSARLRTLVLLLNWLGTILIVLTVSYLVLDEFGIN
MAPILASVGIVGLALGFGGQYLIRDIINGIFILIEGQYSINDIIQIDEFSGVVEVVNLRH
TQLRDLDGRAIYIPNGEIKKVVNFTKGYGQMVLDIGVAYKENVDHVMEVMKKVVEEMRQI
PMCARFIKDFEMFGVEKFGESEIIIRCRFKTRAGKQWEIAREYRRRLKNRFDELGIEIPF
PQRTLNWKTPSQSRQTEETEHTKSATYN
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atggcgaattggcgcgccttattgctttttttagctattttcatcgccggaaatacccac
gccgaagaaacgttaacaccgcaagaaaacaccacaaaaaattcagcttcgccaacgata
acggcggttaaacccaatcctgttccaggagcccaacaacggcaatggattaagctaatc
ggagaaggctttaacgcaaagtcaaaagtcatgttgcgccttagagagcgaattttccct
atcccccccgaacgaactcggttcataagcagcaaaatattggagatctatgtcaatgtt
tccacggggcccgctacctggcaggcacaagtgagcaactcggaaggacaaaagactaag
ccctttagctttgaggtcaagccgccggctgccattgcctcacaaccacaagaagtagag
gaacgaggaagaaaagccgaggtagaggccctagaaaaaaaagcagaagagactgataaa
aaaatagaacaggtgaaagaaaccgctgaggcggccaagctggaggcggcgcaaaccgcc
ctcaaaaaagccacggtgcaacagcaagtggaaaaaacagcacaggcagccagggcagcc
caacagcaactagaagccgccaaggctaaagcccaagccacgggggatgcagctgaccaa
aaagaagttgaaaaattagcggaagaagcggaaaaacgtaaacaggcgactgccgccgaa
gaaagcaggcttgccgctatcgaagctaaagagcaagccgcgaaagaaaaaacgactgct
acggaaactgaaattgaaaaacttcaacaagagtttgcagaattaagaaagcagcgggca
gcaaagcggactttcctagagcaagccacaaccgcagcctggattattttagcgggcttt
attatttggtttataaagagactcgccgtcaataaatttgaaagcgtaacagttaaaaga
gaggaagtccgggaaggcagcgccagactaagaaccctggtgctattactcaattggctt
ggcaccattctaattgtgctcactgtgagctatcttgtcctggatgaattcggcattaat
atggcaccgattttagccagtgtaggaatcgtgggcctcgccctgggctttggtggacaa
tatctgattcgagatatcatcaacggtatttttattctgatagaaggacaatacagcatt
aatgacatcattcagattgacgaattttcgggggttgtggaggtggtgaatctgcgccat
acccaattacgggatctggacggtcgagctatctatatccccaacggtgaaattaagaaa
gtcgttaatttcaccaagggttatgggcagatggtgcttgatatcggcgtcgcctacaaa
gaaaatgtcgaccatgtcatggaggtgatgaaaaaagttgtagaagagatgcggcaaatt
ccaatgtgcgccaggtttattaaagattttgaaatgtttggggtggaaaaatttggagaa
tcagaaatcattattcgttgtcgttttaaaactagagccggtaaacaatgggaaatcgct
cgagaataccggcggcggctgaaaaaccgtttcgatgaactggggattgagattccattt
ccccagcgaacattaaattggaaaacgccttctcaaagccgacaaactgaagaaactgaa
cacaccaaaagtgctacctataactaa
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