Nitrosococcus oceani: Noc_0612
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Entry
Noc_0612 CDS
T00281
Name
(GenBank) Exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
noc
Nitrosococcus oceani
Pathway
noc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
noc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Noc_0612
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
noc03400
]
Noc_0612
Enzymes [BR:
noc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
Noc_0612
DNA repair and recombination proteins [BR:
noc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
Noc_0612
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
ABA57131
UniProt:
Q3JDG5
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All DBs
Position
complement(658835..660193)
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AA seq
452 aa
AA seq
DB search
MESPSHNLNPTREIYTISRLTREARHILEGSFPLLWIEGEISNLSRPSSGHFYFTLKDKI
AQIRCAMFRNRNRLLGFSLEEGTQVLARVQVGLYEARGEFQLIVEYLEEAGDGALRRAFE
ALKQRLSAEGLFAAAHKRSLPILPQRIGIITSPSGAAIRDILSVLKRRFPAVPVLIYPTP
VQGEGAFQRIAAAIAKAEQHRACDLLILARGGGSLEDLWAFNEEALARVIYHCPLPIICG
VGHEIDFTIADFTADQRAPTPSAAAEMAVPDSREWYRNFLNLEQRLKLLFQQHLRHRRQL
LENLTKRLRHPHIRLQEGIQQVDELEQRLERAWTHLNRERFHQLGGLSIQLQRLNPAQHL
KAYHLRLRELNRRLPTCQQQRLGQQQMRLEMVQRALHAVSPQATLERGYAIVTGPKGIVL
RKASQVQPGAKIEARLAEGHIRGEVTEILDKP
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atggaaagcccctcccacaatctaaatcccacccgggaaatctacaccatatcacgctta
acacgcgaagctcgccacatcctggaaggcagttttcccctgctctggatcgaaggggaa
atatccaatttatcgcgcccttcttccgggcatttctactttacgcttaaggataaaata
gcgcagatacgctgcgccatgttccgtaaccgtaaccgtttattggggttttcccttgag
gagggaacgcaagtcctagcccgggtccaagtaggactctacgaagcccggggcgagttc
caattaatcgtcgaatacctggaggaagcgggagatggggctttacgccgggcctttgaa
gcactcaagcaacgcctctccgctgaggggctattcgctgcggcccataaacgctccctg
cctatcttgccgcagcggattggaattattacttcaccctcgggggctgctatccgggat
attctcagcgtccttaaacggcgttttcctgctgttccagtacttatttaccccaccccc
gtccagggggaaggagccttccaaagaattgccgcggcaattgccaaggctgaacaacac
cgcgcttgcgatctgctaatcctggcccggggcggaggttccctagaagatctctgggcc
tttaacgaagaagcgctagcccgcgtcatctaccattgccctctcccgattatctgtggt
gtcggtcatgaaatagacttcaccatcgccgattttactgccgatcaacgggcgcctacg
ccctcggcagcagccgaaatggcggttcctgatagccgtgaatggtatcgaaatttccta
aaccttgaacaacggttaaagcttctatttcagcagcatttgcgccaccggcggcagttg
ctggaaaacctaaccaaacgtctccgtcacccccatatccggctacaagaaggaatccag
caggttgatgagttagagcaacgcctcgagcgggcctggactcacctgaacagagagcgg
ttccatcagctaggcgggctgtcgatccagttacaaagattaaatccagcacagcattta
aaagcctaccacttgcgcttaagggaacttaaccggcgtctccctacttgccagcaacag
cgcctggggcagcagcagatgcggcttgagatggtccagcgggccctccatgcggtcagc
ccccaagcaaccttggagagggggtatgccattgttaccggacccaagggaatcgtgcta
cgtaaagccagccaagtacaacctggagcaaaaatcgaggccagacttgcagagggtcat
attcgtggtgaagtaacagaaattctggataaaccttag
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