KEGG   Nitrosococcus oceani: Noc_0636
Entry
Noc_0636          CDS       T00281                                 
Name
(GenBank) Exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
noc  Nitrosococcus oceani
Pathway
noc03030  DNA replication
noc03430  Mismatch repair
noc03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:noc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Noc_0636
   03430 Mismatch repair
    Noc_0636
   03440 Homologous recombination
    Noc_0636
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:noc03032]
    Noc_0636
   03400 DNA repair and recombination proteins [BR:noc03400]
    Noc_0636
Enzymes [BR:noc01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Noc_0636
DNA replication proteins [BR:noc03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     Noc_0636
DNA repair and recombination proteins [BR:noc03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     Noc_0636
SSDB
Motif
Pfam: RNase_T RNase_H_2 DNA_pol_A_exo1
Other DBs
NCBI-ProteinID: ABA57155
UniProt: Q3JDE1
LinkDB
Position
682483..683100
AA seq 205 aa
MYKELLWIFTQLPDDYIVLDTETTGLPDENGLPDIVTLGITVVSNREIAESVEFKTRPQK
RISEEAQSIHGITNKQAAAFDSFDSQWQQISEYLKHQLIVIHNASFDWPILLDHVLRHGL
AMPEIQGVFCSQKAAIPWAQAMDLPCSHRGPSLDTLTKALGVEDLRVKEDGLHGAKIDSR
QLAQVVQVISRNENMEWVLIVNHRG
NT seq 618 nt   +upstreamnt  +downstreamnt
atgtataaagagctgctgtggatcttcacccaactaccggacgattacatcgtcctcgat
accgaaaccaccggcctgcctgacgaaaacggactgcctgatatcgtgacacttggcatc
accgtggtgagcaatcgagagattgcggaatccgtcgagttcaagacaagaccacaaaaa
cgcatttcagaagaggcacagtcgatacacggcattaccaacaaacaggctgctgcattt
gactcctttgattcccagtggcagcagatttccgaatatctgaagcatcaacttatcgtc
attcataacgccagttttgactggccgatcctgcttgatcatgttttacgacacggattg
gcaatgccggaaattcaaggcgtattttgtagtcagaaagcggctattccctgggcacag
gcaatggatctcccatgtagccacagaggtccttcgttagacacattaacgaaagcactt
ggggtcgaagatctccgagtcaaagaagatgggttacatggggcgaagattgatagccgg
cagttggctcaggttgtacaggtgataagtcgaaatgaaaatatggaatgggtcttaatc
gtgaatcacaggggctag

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