Nitrosococcus oceani: Noc_0846
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Entry
Noc_0846 CDS
T00281
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
noc
Nitrosococcus oceani
Pathway
noc03030
DNA replication
noc03430
Mismatch repair
noc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
noc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Noc_0846
03430 Mismatch repair
Noc_0846
03440 Homologous recombination
Noc_0846
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
noc03032
]
Noc_0846
03400 DNA repair and recombination proteins [BR:
noc03400
]
Noc_0846
Enzymes [BR:
noc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Noc_0846
DNA replication proteins [BR:
noc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Noc_0846
DNA repair and recombination proteins [BR:
noc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Noc_0846
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
ABA57359
UniProt:
Q3JCT7
LinkDB
All DBs
Position
924212..927688
Genome browser
AA seq
1158 aa
AA seq
DB search
MAPSFVHLRLHTEYSLVDSLVRIRPLIQATSEAGMPAVAVTDQSNVFAMIKFYRAAQAAG
VKPIIGADIFLVGSGEHSRVSRFTLLCQNELGYRNLSSLLSRAYREGQYQGIPRLQWDWL
QNLNDGLIILSGGREGDVGQALLAGNDIQAGKLLERWQALFPGRYYLELHRTGREGEEDY
LHAAIALALARDTPVVATNDVRFLRPQDFEAHEARVCIHEGRTLNDPRRPRHYSEQQYLR
TPSEMTELFADLPEALENTVEIARRCNLELTLGKHYLPNFPVPEDLSIEAFLAAEARRGL
EQRLVKLYPREAKRETEQPAYEARLAEELAVINQMGFPGYFLIVADFIRWAKKNGIPVGP
GRGSGAGSLVAYALQITDLDPLAFDLLFERFLNPERVSLPDFDIDFCMERRDRVIDYVSH
YYGRDHVSQIITYGSMAAKAVVRDVGRVLGHPYGFVDQIAKLIPFDLKMTLDKALAESEG
LRSRYEGEEEVRFLIDLARKLEGLIRNAGKHAGGVVIAPKKLTEYVPYYCEQGASGVVTQ
FDKDDIETIGLVKFDFLGLRTLTILDWALQAINRQRTQQGEALLDLALLPMDDPKSYALL
KRCATTAVFQLESRGMKDLIKRLQPDCFEDIIALVALFRPGPLQSGMVDDYINRKHGRAQ
VNYPHPALEPILKPTYGVIVYQEQVMQIAQVLAGYTLGEADLLRRAMGKKKPEEMAEQRA
IFTAGAKAREVDEKTATAIFDLMEKFAEYGFNKSHSAAYAVIAYQTAYLKAHYPASYMAA
VLSADMDNTEKVKAFVEECWAMNLDLLPPDVNASNYSFSAQGETAIRYGLGAIKGVGAAA
LEGIIKVRERHGPYQDLFEFCRRIDLRKVSRRVLEALIRAGALDSLGVERATLEASLETA
LALAEQHCRNASLGQNDLFGLDLVSEEGEAGNYVEVREWDKEQRLALEKETLGLYLSGHP
IDCYKQELKQIAPCRIVELIDRANNRQSRNQQIVIAGLVGSVRTNKARQGGRNAFVTLED
GSARLEIKAFAEVFDKYRERLQLDHIVVIEGALKWDSYADSTAVTAEKIYSIAEAQEVFA
KSLEIGLDGTRMGQEVIAELAQILAPFRQGRCPVAIDYRNRIASARLILGEEWQVRPNEV
LLARLRLLPGAEHVRISY
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
atggctccatccttcgttcaccttcgtctgcatactgaatattccttagtggatagtctg
gtgcggatccgcccccttatccaggctaccagtgaagcgggtatgccagcggtggctgtg
actgatcagagcaatgtgtttgcaatgatcaaattctaccgcgctgctcaggccgcgggg
gtaaaacctattattggtgccgatatttttctcgtgggttcaggagaacacagccgggtt
agccgatttaccttgctctgccaaaatgagctaggctaccgtaatttatcaagcttgctc
tctcgtgcctatagggaaggtcaatatcaaggtatcccccggttgcagtgggattggcta
caaaatttgaatgatggtttgattatcctttccggaggcagggaaggcgatgtgggtcag
gctttgttggctggcaacgatatccaggccggaaaattgctggaacgatggcaagctctc
tttccaggacgttattatttggagttgcatcgtaccggcagagaaggtgaggaagattat
ctccatgcagctatagcactcgctttagctcgtgatactcctgttgtggcaaccaatgat
gttcgatttctcagaccccaggactttgaagcccatgaagctcgggtttgtattcatgaa
gggcggaccttaaacgatccgcgccgtcctcgccattatagtgagcaacagtatttgcga
acgccctcggaaatgacggagttatttgcggacctgcctgaagctctggagaatacggta
gagatcgcccggcgctgtaacctcgaacttacgctagggaagcattatcttcccaatttt
ccggtgccagaggatttgagcatcgaagcatttctagcagcagaagcccgccggggactg
gagcagcggttagtaaagctttatccacgggaggcaaagcgggaaactgagcaacctgct
tatgaagcacgccttgcagaggaactggctgtaattaaccagatggggtttccaggttat
ttcctcatcgtcgctgattttatccgttgggctaaaaagaatgggattcctgtggggcca
gggcgtggctcaggagcaggttccctggttgcttatgcgttacaaattactgatctagac
ccactcgcttttgatcttctctttgagcgatttttaaaccccgagcgcgtgtccttgcct
gatttcgatatcgatttctgcatggagcgtcgggatcgggtgatcgactatgtgagccat
tattatggccgggatcatgtttcccagattattacttacggcagtatggctgctaaagca
gtcgtgcgggatgtgggccgggtgttggggcatccctatggtttcgtagaccaaattgcc
aaacttatccctttcgatctcaagatgactctggataaggctctggcagagtccgaggga
ttacggtcccgttatgaaggggaagaggaagttcgattccttatcgatttggccagaaag
cttgaaggattaatccgaaacgcgggcaaacatgcaggcggggtcgtgatcgcgcccaag
aaattgactgagtatgttccttattactgtgagcagggggcaagcggggtagtcacccaa
ttcgacaaagatgatattgaaaccattggcttggtcaaattcgattttttgggtttgcgt
acgctaaccatcctcgattgggcattgcaggccattaaccggcaacggacccagcaggga
gaggctcttctcgatttggcgcttcttcccatggatgatccaaaaagctatgcgctgctc
aagcgctgcgccacaacggccgtgtttcaattggaatcccgtggcatgaaggacctcata
aagcggcttcagcccgattgttttgaggatatcattgctttagtcgccttattccgacct
ggcccccttcagtccggcatggtggatgattatatcaaccggaaacatggtcgcgcccaa
gtaaattatccccaccctgcccttgaacctattcttaaacctacctatggagtaattgtc
tatcaggagcaggtgatgcaaattgcccaggttttggcgggatataccttgggggaagct
gatttgctgcgccgggccatgggcaagaaaaagcctgaagaaatggccgaacaacgggct
atttttacagcgggagcgaaggcacgcgaggtcgatgaaaagacagcaacggccatcttc
gatctcatggaaaaatttgccgagtatgggtttaataaatcccattctgcggcctatgcg
gtaattgcctatcaaacagcttatcttaaagcccattaccccgcctcttatatggcggcg
gtgctttccgcggatatggacaatacggaaaaggtaaaggcatttgttgaggaatgctgg
gccatgaatttggatctgcttcctcctgatgtgaatgccagcaattattctttttccgcc
cagggtgagactgctattcgctatggcttaggtgcgattaaaggcgtgggagcggcagcc
ttggaggggattatcaaggtgcgggagcggcatggaccttatcaggacctttttgaattc
tgccgccgtattgatttacgcaaagttagccgaagagtcctggaagccttaattcgggcg
ggtgctctggattctttgggggttgagcgggcgacgctagaagcctctttagaaactgct
ctggcgttagcggaacagcattgccgcaatgcttctctgggacaaaatgatttattcggc
cttgatttggtatcggaagagggggaggcagggaattatgtcgaagtcagggaatgggat
aaagaacagcggttggcgctagagaaagagaccttagggttgtatctcagtggtcatcct
attgattgctacaaacaggagcttaagcagatagcaccctgtcggatagtagaacttatt
gatcgagcaaataaccgacagagccgtaaccagcagattgttatagcgggcttggtcggc
tctgtgcgtactaataaagcacgccaggggggacgcaatgcctttgtaacgctggaggat
ggaagtgcccggttggagattaaggcctttgccgaggttttcgataaatatcgggaacgg
ctacagctagatcatatcgttgtcattgaaggcgcgttaaaatgggactcttatgccgat
agcactgccgttacggcggagaaaatctacagtattgccgaggcccaggaagttttcgca
aaaagcctggaaatcggattggatggaactcgcatggggcaagaggttatcgccgagtta
gcgcagattttagcaccttttcggcagggccgttgtcctgttgctattgactatcgtaat
aggattgccagcgcccggctcatactgggtgaagagtggcaagttcggcctaatgaggtg
ctgcttgcccgtttgcggttactgccaggggcggaacatgtgcgaataagttattag
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