Nitrosococcus oceani: Noc_0920
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Entry
Noc_0920 CDS
T00281
Name
(GenBank) Superfamily I DNA and RNA helicases and helicase subunits-like protein
Organism
noc
Nitrosococcus oceani
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Ortholog
Paralog
GFIT
Motif
Pfam:
MTES_1575
AAA_11
AAA_12
AAA_19
AAA_30
DUF559
NAT10_TcmA_helicase
nSTAND3
UvrD-helicase
FtsK_SpoIIIE
AAA_16
PhoH
MeaB
ResIII
DEAD
NPHP3_N
AAA_5
AAA_25
Motif
Other DBs
NCBI-ProteinID:
ABA57432
UniProt:
Q3JCL4
LinkDB
All DBs
Position
complement(1013198..1018066)
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AA seq
1622 aa
AA seq
DB search
MNTSHLLVNDQPVGHPANQKVVRLIHYLTRLASLRSKLIRDLTEYEKILWISDVPHEHGC
FTRAWGQEEEKELDEWLAVQNRREPELPIIPEQCKEWVNQATLREKDRLPELLPEIIRQS
QDPDGRKELDRPATISMTERLEEHPGVQQAWNRYLENKWLPWMEEHNIWEQIHKVYSALF
AIHQAQLRLGEEYELVLGLGLLTWQTPTGQHVRRHLVVANALLEFEARLGKFTVRPYTES
VELRPELDMLDIEERPAHAEETAKSSLSGAEDDPWAKERIDSVLQALVHSINSQGTYDDS
LEMKNIRASARPVVEYAPALILRKRSTKGLSEILGRIKKQIESDENVPSEFADLAEISAR
DERELDNDGLEGLRATFNGEVYFPKPSNDEQRRIIDKLRSANGVLVQGPPGTGKSHTIAN
LICHLLATGQRTLITAKTPRALKVLEELVPGGLRPLCINLLGDGPEERRSLEASVGGILR
KSEEWEEEDAERQREELETRLQELREEKAKINRRLHDIREAETHPQSVAEGTYRGTAARI
AESVNKNRSTFGWFTDSVPLDKTLQISEIDLREILMALRHFTPEKREELNLAWPDSVPSS
ERFVQLVQNEAKASEEERRLADRADDHVADLLANHSSATIENIRDALARFRDTRRKLIMA
SHSWMKEALRDILSGNSALWRELFRVTDHAISEVEGLVAIADNTSIEFLESIDIRVLRED
ARKLKEHMESGGKLGWGPLRSKRVKERLYVIKSVKVDGRSCSTIEHFSILAAVLHVYIEC
EKAWGFWAGQGDKSQEPYVLQLTMLKSLRGALEEALSLQGIIDKCRKAVQECPALDEPSW
NDESKIERIIASCRLALARISKQLAAAELQGIETPISRIAAGGNAHPVTIHVLHAIRDRE
RDGFAQCMSKIQDLEKQYQYLLKRDEDLSKLRQLLPQLADCLERTCNEPYWEERVRHIGN
AWHWAQARYWIGDYIRREDVPALGKRVKQIDDTINDIIAKLASLHAWSFCFSRLTESHRR
HMEAWQQSMRRLGKGTGKHAPRHRREAQGHLNECREAVPAWVMPLHRVWDTVSPTPGMFD
VIIVDEASQCGLEALPLLYLGKKVVIVGDDKQISPESGFVGKEAMFQLMEQFLYDFQYKD
YFHHDASLFDHGKLRYGTRRITLREHFRCMPEIIRFSNDLCYSDTPLIPLRQYSSNRLPP
LEHVFVTGGYCEGSKNRTINRPEANAIVTRIAELCKDSRYDHKSMGVVVLQGEAQAYLIE
NQLAKRLGPEEMERRRLVCGNPYSFQGDERDIMFLSLVAAANKRIGPLTKAADERRFNVA
ASRARDKMILFHSVTFEDLSASCLRRRLLEFFANTQPQQIAGIERDELERRAAQDNRRIV
NPPAPFDSWFEVDVALELLRKEFRILPQHEVAGRRIDLVVEGGQARLAVECDGDHWHGAD
RYEADMQRQRQLERCGWEFFRVRESAFYANKDDALASLWRMLEEREIFPISQCVDLTPKV
NMEEEGYNKSDSDASAADHASYSLNNVEKSIHPSGRRSEEITPSEIEDAILQALSKRPNQ
SCTLDSLTARVLKEIGVSTRGKPREKFERRTLQGVNLLKRRGRIETYKAKNQRLRLIHQE
KT
NT seq
4869 nt
NT seq
+upstream
nt +downstream
nt
atgaatacaagccacctcctcgtgaacgatcaaccggtaggtcaccctgctaatcaaaag
gttgttcgccttatccactacttgacgcgtcttgcttctctccgctcaaaactaattcga
gatcttactgaatacgaaaaaattctgtggatatcagacgttccccatgagcacggctgc
ttcacgcgggcatggggccaagaggaagaaaaggaactggacgaatggctggcagtgcaa
aaccggcgggaaccagagctgcctattattccagaacaatgcaaagaatgggtgaatcag
gcaacccttcgcgaaaaggaccgcttgcccgagcttcttcccgagatcattcggcaaagc
caagatcctgatgggcgtaaagagttggatcggccagcaaccatctcaatgaccgaacgt
ctcgaggaacacccgggcgttcaacaagcatggaatcggtatctcgaaaacaaatggctg
ccatggatggaggagcataatatatgggaacaaatccacaaggtctattcggcgcttttt
gctattcatcaagcgcaactccgcctaggcgaggaatatgaactggtgctcggtttgggg
ctgctgacctggcagacgcctaccgggcaacacgttcggcggcacttggttgtcgccaac
gccctcctggagtttgaggcccgcctgggtaaatttactgtccgtccctatacagaaagc
gtagaattgcgccctgaactcgatatgctcgatatcgaggaacgaccggcgcacgcagag
gaaaccgcaaaatcttcattgagcggagccgaagacgatccatgggcaaaagagcgcatc
gacagcgtacttcaagccttggtgcattccattaactcccagggcacttatgatgattct
ctggagatgaaaaacatccgcgcttcggcaaggcccgtcgtagaatatgcgcctgccttg
attttgcgaaaacgctccaccaaggggcttagcgaaattttaggacgaattaaaaagcag
atcgaaagcgatgaaaatgttcctagcgagttcgcggatctggccgaaatcagcgcgcgg
gacgaacgagagctagataacgacgggctagaaggtcttcgcgcaacgttcaatggagaa
gtctacttcccaaagccatcaaatgatgagcagcgtcgcatcattgacaagctccggtcg
gcaaatggcgttcttgtgcaggggccgccgggaaccggaaaatcccataccatcgccaat
ttaatatgccatctgcttgccaccgggcagcgtacgctgatcacagccaaaactccacgt
gcgcttaaggttcttgaggaactcgttcccggtggattacgtccactttgcattaatttg
cttggcgacggccctgaggaaaggcgttctcttgaagctagcgttggcggcattctccga
aaaagcgaagaatgggaagaggaggatgctgaacggcaacgcgaggaacttgaaacgcgt
ctccaggaactccgcgaggaaaaggcgaaaatcaaccgccgcctccacgatatccgggaa
gccgaaacacatccacaatccgtcgcggaaggaacctaccgcggaacagcggccaggata
gccgaatccgtcaacaaaaatcgaagcaccttcggttggtttacggattctgtacctctg
gataagacattgcagatatctgaaatcgatctacgcgagattctgatggccctgcgccat
ttcacgccggagaaacgcgaagaattgaaccttgcctggcctgactctgtgccctcctct
gaacgctttgtccagctcgtacagaacgaggcgaaagccagcgaggaagagcgccgcttg
gcggatagggccgatgaccacgtggccgatctgctggcaaaccatagctccgctaccatc
gaaaatattcgggacgcacttgcccgttttcgggacactcgacgaaaattgataatggcg
agtcattcatggatgaaggaggcgctgcgcgatatcttgagcggtaattctgctctgtgg
cgcgagcttttccgggttacggaccacgctatttcggaagtcgaaggacttgtcgccatc
gcggataatactagcatcgaatttctcgaatccattgatatcagggtgctgcgtgaggat
gcccgcaagctgaaagagcacatggaaagtggcggaaaactaggctggggaccgcttcgg
tccaaacgggtgaaagagcggctttatgtaatcaaatcggtaaaggtcgatggacgttct
tgttctacaatcgagcatttctcgattcttgccgccgtgctacacgtatacattgagtgc
gagaaggcatgggggttttgggcaggccagggcgacaaatctcaagaaccctatgtgctg
caactgaccatgcttaaatcactgcgtggcgcgctcgaagaagccttgtcccttcaaggc
attattgacaagtgccgtaaagcggtacaagagtgtccggctctggatgagccttcatgg
aacgatgaatctaaaattgaaaggatcatcgcctcatgccgcctcgcattggcccgtatc
agcaagcagcttgccgccgcagaactccaaggcattgaaacgccgatttctcggattgcc
gccgggggcaatgcgcatccagtcaccattcatgtgttgcatgcaattcgagatcgcgag
cgcgatggatttgcgcagtgcatgagcaaaatccaggacttggagaaacaatatcaatac
ctgctaaaacgggatgaggatctctccaaactccgtcagctacttccgcagcttgccgat
tgcctagaacgtacctgcaacgagccctactgggaggaacgagtccggcatattggtaac
gcttggcattgggcgcaggcgcggtactggattggggattatatcaggcgggaagacgtt
ccagcgctcggcaaacgcgtcaaacagattgacgataccattaatgacattattgcaaaa
cttgcctcgcttcatgcctggtccttctgtttttcgcggcttacggaaagccaccggcgt
cacatggaggcttggcaacaatctatgcgacggcttggtaaaggaacaggaaagcatgcg
ccgcgccatcgccgcgaggcccaggggcatttgaatgaatgccgtgaagcggttccggcc
tgggtgatgccgcttcatcgggtctgggacacagtatctcccacgccaggtatgttcgat
gtaattattgttgatgaggcatcacaatgcggtcttgaagcgcttccactgctttatttg
ggaaaaaaagtagtgatcgttggagacgataagcagattagccccgagtccggttttgtt
ggcaaggaggcaatgtttcagttaatggaacagttcctttatgatttccaatataaggat
tatttccatcacgatgctagcctgtttgatcacggaaagttgcgctatgggacacgtcgg
attacgttgcgggagcatttccgctgtatgccagagatcattcgattcagcaacgatctt
tgctactcggatacgccccttattcccctgcggcaatatagttcaaaccgcttaccaccg
cttgagcatgtattcgtgactggaggatattgcgaaggttctaaaaatcgtacgattaac
cgcccagaagccaacgccattgttaccagaatcgccgagttatgcaaggatagccggtac
gatcacaagtcaatgggggtagttgtgcttcaaggagaagcgcaggcatatttgattgaa
aatcaactggccaagcgattaggccccgaggagatggagcggcgtcgcttggtctgtggc
aacccttacagcttccagggagacgaacgcgacattatgttcctatcgcttgttgccgcc
gccaacaagcgaattggcccccttaccaaagcagcagatgaaaggcgattcaatgtcgcg
gccagccgtgcccgcgacaagatgattctttttcattctgtcaccttcgaggatctcagc
gcctcttgtctccgacgacggttgcttgagttttttgcgaatacgcaaccacaacaaatt
gccggtatcgagcgggatgaactggagcggcgggcggcccaagataatcggcgtatcgta
aatccccccgcaccctttgacagttggttcgaggttgatgttgccttggagctgctgcgg
aaggaattccgcattcttccccaacatgaagttgcaggcaggcgaattgaccttgtggtt
gaaggtggacaagcgcgcttggcggtcgagtgcgacggagatcattggcatggcgctgat
cgttacgaagccgatatgcaacgccagcggcaattggaacgatgcggctgggagtttttc
cgcgttagggaatcagctttctacgccaataaagatgacgcgcttgcaagcctctggcgt
atgttagaggaacgagaaatttttcccatctcacagtgtgtggatttaacccccaaagtc
aatatggaagaagagggttacaacaaatccgacagtgatgcttccgcagctgaccatgca
agctattcgttaaataacgtggagaaaagtattcatccatcaggtcgccgatcggaggag
ataaccccatcggaaatagaggatgcgattctgcaagctttgtcgaagcgtccgaatcaa
tcatgtacgctggactcacttactgcccgcgtgctcaaagagataggcgtatcgacacgc
ggaaagccccgggagaaatttgaacggcgtacactacagggcgtcaacctccttaaaaga
cgtggccgcatagaaacttacaaagcaaaaaaccagaggctgaggcttattcatcaagaa
aaaacttaa
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