Nitrosococcus oceani: Noc_1556
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Entry
Noc_1556 CDS
T00281
Name
(GenBank) conserved hypothetical protein
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
noc
Nitrosococcus oceani
Brite
KEGG Orthology (KO) [BR:
noc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
noc03016
]
Noc_1556
Enzymes [BR:
noc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
Noc_1556
Transfer RNA biogenesis [BR:
noc03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
Noc_1556
Prokaryotic type
Noc_1556
BRITE hierarchy
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GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
FimA4_C
Motif
Other DBs
NCBI-ProteinID:
ABA58039
UniProt:
Q3JAV7
LinkDB
All DBs
Position
complement(1730252..1731265)
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AA seq
337 aa
AA seq
DB search
MTKPLLQPLVVNDPFDDPVLYLDFLFQKRALLFDLGDIRALPPRKILRISDIFISHTHMD
HFADFDWLLRLVLRREKKIRLFGPPGFIDQLEHKLKAYSWNLVHNYDNNLAFIATELHPN
AASRQALFRCQRAFSQEHQENNSDLSPGVLIAEPAFRVRTAILDHGIPCLGFTIEESQHI
NIWKNRLQALSLPVGPWLHDLKRAILTQQPDDTPIRIWRQENGKKYQKYLPLGLLKRQIS
RTSPGQKISYIVDIRYSRSNCQKIVELIQGSHLLFIETTFLHKDAEMAAEKQHLTARQAG
WIAREAGVKKLVPINFSPRYSDRRQTLVTEAQEAFKN
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
gtgacgaaacctctattacagccgctagtggtgaatgatccttttgacgatccggtactc
tacctggattttttgtttcagaaacgcgcgctattatttgacctaggagatattcgtgcc
cttcccccacgaaagattctgagaattagcgatatcttcatttctcatactcacatggat
cattttgcggattttgattggttgctgcgattagtgcttaggagagaaaagaaaatacgg
ctgtttggacctcctggctttatcgatcagctagaacataagctgaaagcttacagttgg
aatctcgtccataactacgacaataatctggcctttatagccaccgaattacaccctaac
gcagctagccggcaagcgctttttcgctgccaacgggccttctcccaagaacatcaggaa
aataattcagatctttcccctggcgtactgatagcagaacccgcttttcgggtacgcacc
gcgattttagatcatggcattccttgcttaggctttaccatcgaagaaagccagcacatc
aatatatggaagaaccgcttgcaagcattgagtttaccggtagggccttggcttcatgat
ttaaagcgggcgatcctaacccaacaacctgatgacacacccatcaggatatggcgacag
gaaaacggaaaaaaataccaaaaatacttacctctcggcctattaaaacggcagatctcg
cgcacttctcccgggcagaaaatcagttatattgtcgatatacgctactcgagaagcaat
tgccaaaagatagtagagttgattcaaggttctcatctcctcttcatcgaaactaccttt
ctccataaagatgcggaaatggccgcagaaaaacagcatctcacggcccggcaggctggc
tggatcgcccgggaggcaggggtcaaaaaactggtgcctatcaacttttcaccccgctac
tcggatcggcggcaaaccttggtaacggaggctcaagaagcgtttaaaaattga
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