KEGG   Nitrosococcus oceani: Noc_1804
Entry
Noc_1804          CDS       T00281                                 
Name
(GenBank) Type I site-specific deoxyribonuclease HsdR
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
noc  Nitrosococcus oceani
Brite
KEGG Orthology (KO) [BR:noc00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:noc02048]
    Noc_1804
Enzymes [BR:noc01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     Noc_1804
Prokaryotic defense system [BR:noc02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   Noc_1804
SSDB
Motif
Pfam: T1RH-like_C SWI2_SNF2 HSDR_N T1R_D3-like ResIII
Other DBs
NCBI-ProteinID: ABA58274
UniProt: Q3JA72
LinkDB
Position
complement(2039740..2042946)
AA seq 1068 aa
MTEEQLEQQCLAWFAEGGWELAHGSDLAPGRADYRQVWLLADLEAAIRRINPHLPESCIE
QVVAVVGKPESLDTVVSNRAFHRLLLEGVPVEYKTLSSLSPWERAGVREREEKIVHDRAL
LIDFDDLNANRFRAINQFTLLGSKQLRRPDIICFINGLPLAVLELKSPHAENVDIWDAFH
QLQTYKDEIPELFVFNEALVISDGYHARVGSLTANQERFMPWRTLKHEDDKPLLDWQLET
LVRGFFDRELFLDYLRYFVIFETDSGRLSKKIAGYHQFHAVREAVKATVIAAQEPRQRWA
GEKRATYADDLVPGSKKAGVVWHTQGSGKSLSMCCYAGKLLQQPEMNNPTLMVVTDRNDL
DGQLFATFSAAKELLKQEPVQAEDRDTLRRLLAERASGGIIFTTVQKFALLDGENDHPIL
NDRHNIVVISDEAHRSQYGLKATLKKDGRYTFGYAKHMRDALPNASFIGFTGTPIANEDK
DTRAVFGDYVSIYDIQDAVDDGATVPIYYESRLAKLDINRELIEKLSDQVEAVVEDEEDL
GQREKTKGEWSRLEKLVGSGPRLKQVAADLVRHFEIRSQSMDGKAMIVAMSREICVHLYN
EIVALRPDWHDPDPEKGAIKIVMTGSASDRPLLQPHLYNQQTKKRLEKRFKDIYDPLKLV
IVRDMWLTGFDAPCCHTMYVDKPMKGHNLMQAIARVNRVFKNKPGGLVVDYIGIANALKQ
ALKTYTDAKGKGEPTHSAEEAFAVLLEKLDIIHGLFAKTPQNAGFDYSSFEHEATRLLIP
TANYILSLEGGKKRFLDTILAVNMAYSLCGTLEEARAYHKEVAFLSAVKAALTKHTRVDK
KLTQEEKNSALKQILDNALVAEGVTDVFALCGLDKPNIGLLSEEFLEDVRRMPYKNFAVE
LLEKLLKDNIKAKTRNNVVQEKKYADRLQETLRQYNNRGIETAQVIEELIAMAKQFQAEL
ERDEALGLNPDEVAFYDALANNESAVRELGDETLKKIAVEITDKLRRSTTVDWQVRESIR
AKLRILVRRTLQRYKYPPDKAPEAVELILQQAEVLSDEKRNALTRKNG
NT seq 3207 nt   +upstreamnt  +downstreamnt
atgaccgaagagcaactggaacaacaatgcctggcctggtttgccgagggcggttgggaa
ctggcccacggctccgatctggcgcctgggcgtgctgattaccgccaagtatggttactg
gccgatctggaagcggccattcgccgcatcaacccccacttgccggaaagctgtatcgag
caggtagtggcggtggttggtaagcccgaaagcctggataccgtggtcagcaatcgagcc
tttcaccggttactgctggaaggggtgccggttgaatacaagaccctatcctccctctcc
ccctgggagagggccggggtgagggaaagggaagagaaaatagtccacgaccgggcgttg
ctgatcgatttcgatgatctgaacgccaaccgcttccgggccatcaatcagttcaccctc
ttggggagcaagcaactgcgccgcccggatattatttgctttatcaatggcctgcccttg
gcggtgctggagctgaaaagcccccatgccgagaatgtggacatctgggatgccttccat
cagcttcagacttacaaggacgaaatccccgagctgttcgtctttaacgaggcgctggta
atcagcgacggctaccatgcccgggtgggttcgcttacggccaaccaggagcgctttatg
ccctggcgcactctcaagcacgaggacgacaagcccctgctggactggcagttggaaacc
ctggtgcggggtttcttcgatcgggaattgttcctggattaccttcgttatttcgtcatt
ttcgagacggattccggtcgcctgagcaagaagattgccggttatcaccagttccacgcg
gtgcgggaagcggtgaaggccaccgtgattgccgcccaggagcccaggcagcgctgggcc
ggtgaaaagcgcgccacctacgccgatgacctggtgccgggcagcaaaaaggccggcgtg
gtctggcacacccaggggtccggcaagagtctttccatgtgctgctacgcgggcaagctg
ctgcaacagcccgagatgaacaacccgaccctgatggtggtcaccgaccgcaacgatctg
gacggccaactcttcgccaccttcagcgccgccaaggaactgctgaagcaggaaccggtg
caggcggaagaccgggataccctgcgccgcttgctggccgagcgggcatccggtggcatt
atcttcaccacggtgcagaaattcgccctgctggatggggagaacgatcatcccattctc
aacgaccgccataatatcgtggtgatttccgacgaggctcaccgcagtcagtacggcctt
aaggccaccctgaagaaggatggccgctacaccttcggctacgccaagcacatgcgcgat
gccctgcccaatgcctcctttatcggttttaccggtacccccattgccaatgaagataag
gatacccgcgccgtgttcggcgattatgtgtccatctatgacattcaggatgcggtggac
gatggggctaccgtgcccatctattacgaatcccggctggccaaattggatatcaaccgg
gagctgattgagaaattatccgaccaagtggaagcagtggtggaggatgaggaagacctc
ggccagcgggaaaaaaccaagggcgagtggagccgcctggaaaagctggtggggtctggg
ccgcggcttaagcaggtggctgccgatctggtgcggcactttgaaatccgctctcagtcc
atggacggtaaagccatgatcgtggccatgagccgggagatttgcgtgcatctgtataat
gagattgtcgccctgcgcccggactggcacgacccggacccggagaaaggggccatcaag
attgtgatgactggctccgcctctgacaggcccttgttgcaaccgcacctttacaaccag
cagaccaagaaacgactggagaagcgcttcaaggacatctatgatcccctcaagctggtg
attgtgcgggatatgtggctcaccggctttgacgccccttgctgccataccatgtatgtg
gacaagcccatgaaaggccataacctgatgcaggccattgcccgcgtcaaccgggtgttc
aagaacaagcccggcgggctggtggtggactatatcggtatcgccaatgcgctcaagcaa
gccctgaaaacctataccgacgccaagggcaagggcgagccgacccacagcgcggaagaa
gcctttgccgtgctgctggagaagctggacattatccacgggctgtttgccaagacaccc
caaaatgctggctttgattacagcagctttgagcatgaggcgacccgattgctgattccc
accgccaactatatattgagccttgagggcggtaagaagcgtttcctcgatacgattctt
gctgtgaatatggcctactctttgtgtggcaccctggaggaggcccgggcctatcataag
gaggtcgctttcctatcggcggtgaaggctgcccttaccaagcacacccgcgtggacaag
aaattgacccaggaggaaaaaaattccgccctcaagcagatcctggacaatgccctggtg
gcggaaggcgtgaccgacgtgtttgcgttgtgcggattagataaacctaacatcggcctg
ctctcggaggaattcctcgaagacgtgcggcggatgccttacaagaatttcgccgtggag
ctactggaaaagctgctgaaagacaacatcaaggccaaaacccgcaataacgtggtgcag
gagaagaaatacgctgatcggctgcaagagaccctgcgccaatacaacaaccggggcatt
gaaaccgcccaggtgatagaagagctgatcgccatggccaagcaattccaggcggaactg
gagcgcgacgaagccctgggcctgaacccggatgaagtagccttctacgatgccctggcc
aacaatgagagtgcggtgcgggagttgggtgatgagacgctgaagaaaatcgccgtggaa
atcactgacaagctgcgcaggtccactaccgtggactggcaggtgcgggaaagcatcagg
gcaaaattgcggattctggtgcgccgaacgttgcaacggtacaaatatccgccggacaag
gccccggaagcggtagagctgattttgcagcaagccgaggtactatcggatgaaaagcgc
aacgcgctaacaagaaaaaacgggtaa

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