Nitrosococcus oceani: Noc_1888
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Entry
Noc_1888 CDS
T00281
Name
(GenBank) hydroxymethylglutaryl-CoA lyase
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
noc
Nitrosococcus oceani
Pathway
noc00280
Valine, leucine and isoleucine degradation
noc00650
Butanoate metabolism
noc00907
Pinene, camphor and geraniol degradation
noc01100
Metabolic pathways
noc01120
Microbial metabolism in diverse environments
noc04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
noc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
Noc_1888
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
Noc_1888
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
Noc_1888
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Noc_1888
Enzymes [BR:
noc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
Noc_1888
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GFIT
Motif
Pfam:
HMGL-like
Motif
Other DBs
NCBI-ProteinID:
ABA58354
UniProt:
Q3J9Z2
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Position
complement(2152365..2153285)
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AA seq
306 aa
AA seq
DB search
MSALFPDRVKLVEVGPRDGLQNEPGRVETATKIEFIQRLAETGLPVIEATSFVSPRWVPQ
LADAEAVYAGVQRQPGVRYPVLVPNQAGLERALAAGVADIAVFTGVTETFCQKNIHCSVA
ESLDRYQPVIAKAREKRLGVRAYLSCVLGCPYEGPVAARQVARLARWFADLGVDEISLGD
TIGIGTPLQAQQLLAAVAEEIPLARLAVHFHDTYGQALANIFACLELGVSVIDSAVAGLG
GCPYAKGATGNVATEDVVYMLEGMGIETGVDLKKLIEVGNYICQTLTRENQSRVGRARIS
RLKQIT
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcattatttcctgatcgggtcaaactcgttgaagtggggccccgcgacggcctg
caaaatgaacccggcagagtggaaacggccactaaaatcgagtttattcagcggttggct
gaaacggggctgccggttatcgaggcgaccagctttgtcagtccccgctgggtgccccaa
ttggcggatgccgaagcggtgtatgccggcgttcaacgccagcccggcgtgcgctatccg
gtgctggtgcccaatcaggccggactggagcgggcgcttgccgccggggttgcggatatt
gccgtattcaccggggtaacggagaccttttgccaaaaaaatatccattgttccgtggcg
gaatcactggatcgttatcagccggtgattgccaaggctcgggaaaaacggctaggggtg
cgggcctatctatcttgtgttttgggttgcccctacgagggtccggtggcagctcgccag
gtggcccgtttggcgcgctggtttgccgatctgggcgtggatgagatcagcctcggcgat
accattgggatcggcactcccttgcaggcccaacagctactggcggcggtggcggaagag
attcccctggcgcggttggcggtgcatttccatgatacctacggccaggcgctggccaat
atttttgcttgcctggaacttggggtctccgttattgacagcgctgtggctggtttgggt
gggtgtccttatgccaagggagccactggcaatgtagcgacggaagatgtcgtgtatatg
ttggagggaatgggtattgaaaccggcgtggatcttaaaaaactgatcgaggtgggtaat
tatatttgccaaaccctgacccgggagaaccaaagccgggtaggccgggcgcggataagc
cgcttgaagcagataacttga
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