Nitrosococcus oceani: Noc_1925
Help
Entry
Noc_1925 CDS
T00281
Name
(GenBank) TonB-dependent receptor
KO
K16092
vitamin B12 transporter
Organism
noc
Nitrosococcus oceani
Brite
KEGG Orthology (KO) [BR:
noc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
noc02000
]
Noc_1925
Transporters [BR:
noc02000
]
Other transporters
Pores ion channels [TC:
1
]
Noc_1925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
ABA58387
UniProt:
Q3J9V9
LinkDB
All DBs
Position
complement(2202059..2203987)
Genome browser
AA seq
642 aa
AA seq
DB search
MKIFSAFGLVGWVVFGSFVYAGEQQTPKTLEPIVVTATRTPTPVQDVGSDMSVITAEDLV
QRQRMPVLEVLRGLPGVDVVQSGGLGQQTSVFLRGANANHTLVLIDGVEANDPSNPSGSF
DFANLLTDNIERIEILRGPQSTLYGSDVIGGVINIITKKGRGKPRVTARVEGGSFSTFKA
TGGVHGGNDLVNYSLTGTRLESAGISAADSRRGNPEKDGDRNTTLAGRFGLTPTPIFSLD
TTLRYNGNHTDIDGYRGVVPIDDPNSTLDSQQLFLRGQGHLTLFDNLWEQILGVSFTHHD
RENQNRPDPQNPFPFPGSFKGEKIQVDWQNNLQFSKKHTLTFGFAWEEASMEAQSPGSNL
PRQSVDTEGYYLQAQLSFWDKLFLTGGVRLTHHSIFGSKITERVTAALVLDTLGLTLRSS
YGTGFKAPTLSQLFDDRFNAPQDNRFNTPQLKFNNRDLKPEKSSSWDIGVEQSFWDEQGA
VGVTYFDNELTDLIQFSQVAADKFQLINIDAAKIKGWEVFMNLTPLKGLTLRGNYTQMHT
QDEKTGQPLVRRPEHKAGFNANYRFLSKGNLHLQVVYVGHRQDVGGIPLPSYTVVNAAIS
YEVTNYFQLFARANNLLDKQYQEVFGFGTPGISGFGGIEFSF
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaatattttcagcgtttggattagttggttgggtcgtttttgggtcttttgtctat
gccggtgagcagcagaccccaaaaaccctagagccgatagtagtgacggcaacacggact
ccaacgccagtgcaagatgtagggagtgatatgagtgtcattaccgccgaggatcttgtt
cagcggcaaagaatgccagtattagaggtattgcgggggctgcccggggtcgatgtggtt
caaagcggcggtttaggacagcagacctcggtattcctgcggggggcaaacgctaaccat
accctggtactcattgatggggtagaagccaatgatcccagcaaccccagtggttctttc
gatttcgccaatttgctgacggataatatcgagcgcattgagattctgcgagggccgcaa
agcaccctttacggttccgatgtcattggtggcgttattaatattattactaagaaggga
aggggcaagcctcgcgttaccgctcgcgtcgaaggtggctcttttagtaccttcaaggcg
acaggcggagtacatggcggaaatgaccttgttaattacagcctgaccgggactcgcctt
gaaagcgctggcatctcagcggctgattctcgccggggcaacccggaaaaagatggtgat
cggaatacaaccctcgcggggcgattcgggctaacgcctacgcccattttttcccttgat
actaccttgcgctataacggtaaccatactgacattgatggctacagaggtgtcgtgccc
atagacgatcctaattcgactctggatagccaacagttgtttctccggggtcaaggacat
cttactttgtttgataatctatgggaacaaatacttggggtttcttttacccaccatgat
agggaaaatcaaaatcggcccgatcctcagaacccttttcctttcccaggttcttttaag
ggggagaaaatccaagtggattggcaaaataatttgcagttctctaagaagcatacccta
acctttggattcgcctgggaagaggccagcatggaggcccaatcgccgggttcaaacttg
ccccggcagagcgttgacaccgagggatactacttgcaagctcaattgagcttttgggat
aagctgtttctcactggcggggtgcgcttgactcatcatagtatttttggctccaaaatc
actgaacgggtaaccgccgccctggtgcttgacacgctggggctcacgctcagaagcagc
tatggcactgggtttaaagcccctactttatctcagttattcgatgatcgctttaatgcc
cctcaggataaccgcttcaatactcctcagcttaaattcaacaatcgggatttaaagcct
gaaaagagcagctcctgggatattggggtagagcaatcattttgggacgagcaaggggcg
gttggggtgacctactttgacaatgaattgaccgatttaattcagtttagccaggtagct
gctgataagttccagcttattaatatcgatgcggccaaaattaaaggctgggaagtcttt
atgaatttaacgccccttaaggggctgactttgcggggaaattatacccagatgcatact
caagatgagaaaaccggtcagcccttggtgcggcgtccggaacacaaagcaggctttaac
gctaattaccgctttttgagtaagggtaacctccatcttcaggtggtttatgtggggcat
cggcaagatgtagggggtatccctctgcctagctatacagtagttaacgctgctatttcc
tatgaggtcactaactattttcaattatttgcccgggcgaataatctgctggataaacaa
tatcaggaagtgtttggattcggcacaccaggcatctccggctttggtggtatcgagttt
tctttttga
DBGET
integrated database retrieval system
