Nitrosococcus oceani: Noc_2118
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Entry
Noc_2118 CDS
T00281
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
noc
Nitrosococcus oceani
Brite
KEGG Orthology (KO) [BR:
noc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
noc03016
]
Noc_2118
Enzymes [BR:
noc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Noc_2118
Transfer RNA biogenesis [BR:
noc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Noc_2118
Prokaryotic type
Noc_2118
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
Sep15_SelM
Motif
Other DBs
NCBI-ProteinID:
ABA58578
UniProt:
Q3J9B8
LinkDB
All DBs
Position
complement(2439503..2440429)
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AA seq
308 aa
AA seq
DB search
MKKQRRFQGQDIHGMLLLDKPVGISSNGALQRVKQIYQARKAGHTGSLDPLANGLLPICL
GEATKLSGFLLEADKRYQVMCRLGVVTTTGDADGEVLETHPVNELDRDEVAKFLSGFSGP
QEQVPPMYSAIKHQGQRLYKLARQGIEVERKSRQVTIHTIKLTELVNNELGFEVFCSKGT
YIRTLAEDIGRALGCGAHVIALRRTQVGSFGASDMISLEELEMLAETNVEALGNLLLPVG
QILADWPAVNLIADLAYYLRQGQSVRVPQAPSEGWVRLIECGKGFFGVGRITEDGRIAPR
RLIFSQSG
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaacaacgccgctttcaaggccaggatattcacggaatgctcctattggataaa
cccgtaggcatcagctctaatggtgctctgcagcgagttaagcagatttaccaagcccga
aaagcaggacatacaggcagtctagaccctcttgcaaatggattgttgccaatttgtttg
ggggaggcaactaaactgtcggggtttttgctagaagccgataagcgttatcaggtgatg
tgccgtctcggcgtagtgactaccactggggacgctgatggcgaggtgctagaaacccat
cctgtcaacgagttagatagggacgaggtggcgaaatttttgtccggcttctctggcccg
caagagcaagtgcctcccatgtattcggcgattaaacaccagggccagcggctctataaa
cttgcccgccaaggaattgaagtggagcgcaaatctcgccaggtgactatccataccatt
aaattgacggaattagttaataatgagctagggtttgaggtcttttgctctaagggaact
tatattcgtaccttggctgaagacatcggtcgggcgctaggatgcggcgcccatgttata
gcgctgcgccgtacccaagtcggttcttttggtgcttcggatatgatctctctggaggag
ctggaaatgctagccgagacgaatgttgaggcactcggaaatttgctgttacccgtaggg
caaattttggcggattggcctgcagtaaatctaatcgccgatttagcctactatctgcgg
caggggcaatcggtacgggttccgcaagctccaagcgaaggctgggttcgtttaatagag
tgtggcaagggattttttggagtagggcggattacggaggatggacgtattgctccgcgc
cgtttgattttcagtcagagcggttaa
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