Nitrosococcus oceani: Noc_2121
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Entry
Noc_2121 CDS
T00281
Name
(GenBank) NusA antitermination factor
KO
K02600
transcription termination/antitermination protein NusA
Organism
noc
Nitrosococcus oceani
Brite
KEGG Orthology (KO) [BR:
noc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
noc03021
]
Noc_2121
03009 Ribosome biogenesis [BR:
noc03009
]
Noc_2121
Transcription machinery [BR:
noc03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
Noc_2121
Ribosome biogenesis [BR:
noc03009
]
Prokaryotic type
rRNA transcription factors
Noc_2121
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
S1
KH_NusA_C
KH_2
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
ABA58581
UniProt:
Q3J9B5
LinkDB
All DBs
Position
complement(2443399..2444919)
Genome browser
AA seq
506 aa
AA seq
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MNKEILMVVDAVSNEKGVNKEVIFQAIEAALAMATRKRYQEDIAVQVVIDRTTGDYQSFR
SWEVIEDEAELDAPERQMHLSEACKRDPNAEVSGFVKEPMESIAFGRIAAQTAKQVIVQK
VREAERAKVVAAYRGRIKEMVMGVVKRMDRGNIILDLGDNAEGIVPQEEMIPREAVRPGD
RLRGYLKEVRAEGRGPQLVISRTAPELLIELFKLEVPEINENRIEVKGAARDPGLRAKIA
VKTNETRIDPVGACVGMRGSRVQAVSNELAGERVDIVLWDEDPARFVINAMAPAEVASIV
VDEERHSMDVAVAEGNLSQAIGRGGQNIRLASQLTGWELNVMTEQEAEEKGESEAKSLQQ
MFMEQLDVDEEVAAILVHEGFSSIEEMAYVPEQEILAIEEFDSQIVQELRNRARDVLLTR
AIANEETIETVQLDQELLDMEEIDHGLASALASKGIVTKENLAEQAVDELMEIEGMNREK
AARLIMAARESWFVSEKQDEETEERQ
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaagaaattctgatggtagtagacgctgtttccaatgaaaaaggcgtaaacaag
gaagtcattttccaggcgattgaggcggctctggcgatggcgactcgcaagcgttatcaa
gaggatattgcagtgcaggtcgtcattgatcgaacaacgggcgattaccaatcctttcgg
tcttgggaagttatcgaggatgaggcagaattggatgcgccagagcgccagatgcatttg
agcgaagcgtgcaaacgggatcctaacgccgaagtgagtggctttgtgaaagaacccatg
gagtcgatagcatttgggcgtattgctgctcaaaccgctaaacaagtgattgttcaaaag
gtgcgggaggcggaacgggctaaggttgttgcagcctaccggggccggattaaagagatg
gtcatgggggtggttaaacgcatggatcgtggcaacattattctggatcttggagacaat
gccgagggtattgttcctcaagaagagatgatacctcgtgaggcagtccggccaggagat
cgattgcgaggctatcttaaggaagtacgagctgaagggcgagggcctcaactagttatt
agcaggactgccccggagcttctcattgagttgttcaagttagaggttcctgaaatcaac
gagaatcgtattgaagttaagggtgctgctcgggatccaggccttcgggctaaaattgcc
gtaaaaaccaatgaaactcgtattgatccggtaggagcctgcgtgggcatgcggggttct
agagttcaagctgtgtcgaatgagcttgctggtgagcgagtggacatcgtgctttgggac
gaagatcctgcgcgctttgtaattaatgctatggcgccagcagaggtcgcctctattgtg
gttgatgaggagcgccatagcatggacgttgctgtggccgaggggaatctctctcaagct
attggccgtggagggcagaacatacgtttggctagccagctgaccggctgggagttgaat
gtaatgacggaacaagaagcagaagaaaaaggtgaaagcgaagcaaagtcgctccagcag
atgtttatggaacagttagatgtggatgaggaagtggcggctatcctagtacatgaaggt
ttttctagtatcgaagaaatggcctatgtgccggaacaagagattcttgctatagaggag
tttgactcccaaatcgttcaggaactacgtaatcgagcccgtgacgttcttcttactcga
gcaattgctaatgaagagactattgagaccgtacagctagaccaggaattattggacatg
gaagagattgaccatggattagcctctgcactggccagcaaaggtattgtaactaaagaa
aatttggcggagcaggcggtggatgaactcatggagatcgaggggatgaacagagagaaa
gctgctcgtctcattatggcagcacgagagtcctggtttgttagcgagaaacaggatgaa
gaaacggaggagcggcaatga
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