Nitrosococcus oceani: Noc_2274
Help
Entry
Noc_2274 CDS
T00281
Name
(GenBank) fimbrial assembly protein
KO
K02674
type IV pilus assembly protein PilY1
Organism
noc
Nitrosococcus oceani
Brite
KEGG Orthology (KO) [BR:
noc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
noc02044
]
Noc_2274
02035 Bacterial motility proteins [BR:
noc02035
]
Noc_2274
Secretion system [BR:
noc02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
Noc_2274
Bacterial motility proteins [BR:
noc02035
]
Pilus system
Pilus assembly proteins
Noc_2274
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T4P_PilY1
PQQ
PQQ_3
Motif
Other DBs
NCBI-ProteinID:
ABA58732
UniProt:
Q3J8W4
LinkDB
All DBs
Position
2620535..2624947
Genome browser
AA seq
1470 aa
AA seq
DB search
MMEKFRLNLPAYYAAAAALALGYVGNTQGANLNLNNKPLFLTDNAPPLTMLVMGKDHKLY
YEAYNDASDLDGDGTIEIGYKPARVDYYGYFDSHKCYVYSGNRFEPSTAASDKTCSGAWS
GDFLNYLTTSRMDALRKVFYGGQRDIDTASETVLAGAFIPQDAHSWGKEYTSIAVDGYDL
NHYAPLTLPNAGKRHLFAVTSLADGNIPVLRVLQDKSERIWEWVSKEKPVADDSLGTPDD
YSIRILACSSSLPEINCQQYGASSYKPTGLLQKYGENDSMYFGLLTGSYAKNTSGGVLRK
KVGSITDEIDPGTGVFTTTNGIIKTIDNLRIIQFLYGKKPAYSPGWPEAWITTRPMTEGE
QPNWGNPIAEMMYEGLRYFAGKASPTPAYSIGAGTSPDADLGLPVATWDDPYASGNFPSC
SKPFQIVISDINPSYDTDQLPGSYFSSFTGDVSGLNSQALADTISSHEPEVAGSHFIGQS
GTNADGTPSAKDVTSLGDIRGLSPEEPTKLGGYYSASVAYFGHINDLHSADGEQKMSTFA
VALASPLPKIEIPVNGQIITLVPFAKSAGTTNGCAVDAISSAAGDFQPTNQIVDFYAETV
TPTYGKFRINYEDVEQGADHDMDAIVEYEYQVNNDGTVSITLNSTFASGCIIHHMGYVIS
GTTADGTYLEVRDNDTSVGQDPDYFLDTPPGASPGNGWQDDAALPLTTTRTFTPGTGSAA
TLLRDPLWYAAKWGSFNDRNKDNIPQGTEWDINNDDIPDNYFSVTNALQLETQLTKAFEE
IIEETSSNSLVALNSGSISTNSHLYQARFSSGAWTGQVLDFPINSDGSLGAKNWEAADLL
DGVSSNSRKIVTYKPSTGKGIPFRWPADPDSPGSTELDVSQSTALNADPATGTADGRGSE
RLDYIRGDEISGFRERTRKLGDIVHSSPVYVGPSPQYRYPDDWTDIKHNEDSQNEDSSPY
SSFKSNTSRDAMVYVGANDGMLHAFDAVTGQERFAYVPNAVIKNLNRLTDPNYNHHYYVD
GTPTVVDAFFGSDWHTLLAGGLGGGGQGIFALNITTPGTSESSIASKVLWEFTDTDDPDL
GYTFSEPNIVRMHNGKWAVVFGNGYNNTENDGSASTTGNAVLFIVDAETGALIKKIDTGI
GSDDPASGNRPNGLATVAPVDIDGDFIVDYIYGGDLLGNLWKFDVKESPNKWKVAHGQPL
FTAKAADNSYQPITTRPQVGHHPTDPGSVMVYFGTGKYLETNDDSSTGQTTQTFYGIWDK
NDDKKFTSFTRSSLLQQEIIKEVVQSFTDEDGSGNTGFELRVTTKHPIDWSTHEGWYMDL
VNTENGNTNNYGEKQVSDSVLRNNRIIFTTLLPSDELCDFGGTGWLMELDAASGGHLSFA
PFDLNNNGTFTRADYINLGDTDGDGNDDYVPPGGKKSKVGIISTPGIISGPGTNPGWEAK
YTSGSTGNIEVTSENAGPGYFGRMSWIQLR
NT seq
4413 nt
NT seq
+upstream
nt +downstream
nt
atgatggaaaagtttcgacttaacctccccgcttactacgctgcagctgccgcccttgcc
ctgggttatgttggcaatacccagggagccaatctgaatctgaataataaacctctgttt
ctcacagacaatgcccctcctctcaccatgctagtgatgggaaaagatcataagctttac
tatgaagcttataacgatgcttccgatctagacggagatggcaccatcgagattggctac
aagcccgcgcgtgtggactactacggttatttcgactcccacaaatgctatgtttacagc
ggcaaccgctttgagcccagtaccgccgccagcgacaaaacctgctccggtgcctggagc
ggagattttctgaattaccttaccacctcccgcatggatgccctgcggaaagtgttctac
ggtgggcagcgggatatcgacacggcttcggaaactgttttggcgggagcgttcattccc
caggatgcccatagctggggcaaggaatacaccagcattgccgtggacggatatgatctc
aaccactacgctccacttactttacccaatgcaggaaagcggcatctgttcgcggtcacc
agccttgccgatggcaacatcccggtcctgcgagttttgcaagataaatcggaacgtatc
tgggaatgggtcagcaaagaaaagcccgtggccgatgactctttgggcacgccagatgat
tattcgatccggatactggcctgctcctcttccttgccagagataaactgccagcaatac
ggtgcctcttcttacaaacccactgggctactgcaaaaatacggcgaaaacgacagtatg
tactttggcctgctcaccggctcctatgccaagaacacttccggcggggtattaagaaaa
aaggtggggagtattactgatgaaatcgatcctggcaccggggtctttaccaccaccaac
ggcatcatcaaaaccattgataatctgaggattattcagtttctttatgggaagaaacct
gcctatagccccggctggccggaagcttggatcactacccgccccatgactgaaggggaa
caacccaattggggcaatcccatcgccgaaatgatgtatgaagggctgcgctattttgcc
ggcaaagcatcccccaccccggcctattccattggggccggtacctccccggatgcggat
ctggggctacctgtggctacctgggatgatccctatgccagcggcaactttccaagctgc
tccaagcctttccagattgtcatcagcgatattaatccctcctatgacactgatcagctc
ccaggaagctatttttccagcttcacaggagatgtttccgggctcaatagccaagctctg
gcggatactatttccagccatgaaccggaggtcgccggcagtcatttcatcggccaatcc
ggcaccaatgctgacggcactccctcggcgaaagatgtcactagcctgggagatattcgg
ggcctctctccagaagagcccactaaactggggggttattactcggccagcgtggcttat
ttcggtcatatcaatgacctccattccgccgatggggaacaaaaaatgagcacctttgcc
gtagccctggcctcacccttgccaaaaatcgagatcccagtcaatggccaaatcatcacc
ctggttccttttgccaagtccgcgggcacgaccaacggttgtgccgtagacgctatcagt
agcgccgcaggagactttcaacccaccaatcaaattgtggatttctatgcggagacagtc
acacccacctatgggaaattccgcatcaactacgaggatgtggaacaaggagccgatcat
gatatggatgccatcgtggaatatgagtatcaggtcaataatgatgggactgtgagtatt
actctaaattccacctttgcctccggctgtatcatccatcatatggggtacgtgatttca
ggcaccaccgctgacggtacctacctagaagtcagggataatgatacctctgtcggacaa
gatcctgactatttcctagacacgccccccggcgctagccccggcaacggttggcaagac
gacgcggccctacctctcaccaccacccgcaccttcacgccaggcaccggcagcgccgcg
accttattacgggatcccctatggtatgccgccaaatggggcagctttaacgaccgcaac
aaagacaatatcccccaaggaacggaatgggacattaataacgacgacattcccgataat
tacttttcggttaccaacgccctgcaactagaaacacaattaaccaaagccttcgaggaa
attattgaagaaacttcctccaattccttagtggccttgaatagcggctccatcagcacc
aatagtcatctctatcaagcccgcttcagcagcggcgcctggacaggacaagtgctggat
ttccccattaatagcgatggcagcctgggcgccaaaaactgggaagcggctgatttacta
gatggtgtttcgagcaatagccggaaaatcgtgacttataaaccctccacgggtaagggc
attcccttccgctggcccgcggaccctgactcccctggaagcaccgaacttgatgtttcc
cagtccacggccctgaacgccgatcccgccactggcaccgccgatggtagaggaagtgaa
cgccttgactacatcagaggcgatgaaatttccggctttcgtgagcgaacgcgcaagctc
ggcgatattgtccattcctcccccgtgtatgtgggcccctccccgcaataccgttatccc
gatgactggacagacataaaacacaacgaagatagccaaaatgaggatagtagcccctat
tcaagcttcaagagcaacaccagccgggacgccatggtctatgtaggcgccaatgacggc
atgctccacgccttcgatgccgtaaccggtcaggagcgctttgcctatgtccccaacgcc
gtcatcaaaaaccttaaccggctaaccgatcccaattacaaccaccattattatgtggat
ggaactcccacggtagtagacgcctttttcggtagcgactggcacactttattggcggga
ggtctggggggcggcggccagggaattttcgccctgaatatcactaccccaggcaccagc
gagagcagtattgcttccaaggtgctctgggaatttaccgataccgatgatcccgacctg
ggttacaccttcagcgagccaaatatcgtacgcatgcacaacggcaaatgggcggtcgtc
tttggcaatggttacaacaataccgaaaatgacggcagcgccagcaccacgggcaatgcg
gtgctttttatcgtggatgcggaaaccggcgcgctgatcaaaaaaatcgatacgggaata
ggctcagatgaccctgctagtggaaatcgccccaatggactggccaccgtagcccctgtg
gatatagatggcgactttatcgtcgattatatctatggcggggatctgttaggcaatctg
tggaagttcgatgtcaaggaaagtccaaacaagtggaaggtggcccatggtcaaccactt
ttcaccgccaaggccgccgacaacagttaccaacccatcaccactcgtcctcaagtgggg
caccatcccacggaccccggctctgtaatggtttacttcggcacgggaaaatatcttgag
accaacgacgatagctcaacgggacaaaccacccaaactttttatgggatttgggataaa
aatgatgataaaaaatttacttcgtttacccgatctagcctactccagcaagagatcatc
aaggaagttgtccagtcctttactgatgaagatggttccggcaacaccggctttgagctt
cgggtaactacgaaacaccccattgactggtcgactcacgagggttggtacatggattta
gtgaacactgagaacggcaacaccaataactatggtgaaaagcaggtcagcgattccgtg
ctgcgcaacaatcgcattattttcaccacgctgcttccctccgacgagctctgcgacttt
ggcggcacgggctggctgatggagttggatgcggccagcgggggccatttgtcctttgcg
ccttttgatctcaataataacgggacgtttacgcgtgccgattacattaatctgggcgat
actgatggcgatggcaatgacgactatgtgccgcccggcggcaaaaaatcgaaggtgggc
attatcagcacaccaggtatcatctctggccctggaaccaatccgggatgggaagccaaa
tataccagcggctccaccggcaatattgaagtcacgtcagaaaatgccgggcctggttat
tttggccgtatgtcctggattcaactgcgctaa
DBGET
integrated database retrieval system
