Nitrosococcus oceani: Noc_2361
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Entry
Noc_2361 CDS
T00281
Name
(GenBank) two component Sigma-54 specific, transcriptional regulator, Fis famliy
KO
K10943
two-component system, response regulator FlrC
Organism
noc
Nitrosococcus oceani
Pathway
noc02020
Two-component system
noc02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
noc00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Noc_2361
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Noc_2361
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
noc02022
]
Noc_2361
02035 Bacterial motility proteins [BR:
noc02035
]
Noc_2361
Two-component system [BR:
noc02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
Noc_2361
Bacterial motility proteins [BR:
noc02035
]
Flagellar system
Flagellar assembly proteins
Others
Noc_2361
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
HTH_30
AAA_2
AAA_16
Mg_chelatase
AAA
AAA_19
FleQ
MCM
HTH_11
HTH_20
nSTAND3
RP-C
HTH_28
AAA_7
Sigma70_r4_2
CggR_N
AAA_3
HTH_24
ATPase
Motif
Other DBs
NCBI-ProteinID:
ABA58819
UniProt:
Q3J8M7
LinkDB
All DBs
Position
complement(2705598..2706947)
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AA seq
449 aa
AA seq
DB search
MMHPTVLVVEHEPALREALCATLSVAGFPVKSVPEGKAALVQLEKNKHIGLLLSDIQTQP
LDSSTLLRRARTQKPDLPVLFIAAHSTIHTAIDALDEGAVDYLLKPFETKALLDRVRRYV
GVLKKGEPVVAVDPCFRRVVALAQRVAKSEATVLLSGESGTGKEVLARYIYRQSPRCKGP
FVAINCAAIPENRLEATLFGYEKGAFTGAYQAQPGKFELAQGGTLLLDEISEIDLGLQAK
LLRVLQEREVERLGGGKMIPLDIRILATTNRDLQEQVANGRFREDLYYRLNVFPLYLPPL
RERSKDILPLARRLAAARAAENGRVLSRFSLAAEKKLLAYPWPGNIRELDNVIQRAMILA
DEDELTLQSLVFDAGIWATPISGEARELNKNLKDHEKQFILETLGQCNGRRKQAAVRLGV
SERTLRYKLARLREAGVVIPDFPSSRLAC
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaccccacggttctggtcgttgagcatgagccagctctgcgggaggctttatgc
gctaccttgtctgtcgctggttttccagtaaagagtgttcctgaaggaaaggcagcccta
gtccagctggaaaaaaataagcatattggccttttactgagcgatattcaaacccagcct
ttggatagttccacactattacgccgggcaagaactcagaagccggatttaccagtgctg
ttcattgctgctcatagtaccatccatactgctattgatgctttggatgagggtgctgtg
gactatttgcttaaaccttttgaaactaaagctctgcttgatcgggtgcgccgttacgtg
ggggtattgaaaaaaggtgagccagtggtggcggttgatccttgtttccgcagagtagta
gcgttggcacaacgggtagccaagagtgaggctaccgtactccttagtggtgagagtggc
accggcaaggaagtattagcccgctatatctatcgccagtcaccccgttgtaaaggccca
tttgtcgcgataaattgtgctgctattccggaaaataggcttgaggccaccttattcggc
tacgagaagggtgcttttacgggtgcctaccaagctcagcccggtaaattcgaactggcc
cagggaggcactttattgctcgacgagatttcggaaatagacttgggtttgcaagcaaag
ttactccgggtgttacaagagcgggaggtggagcgcctaggagggggcaagatgattccg
ctggatatacgaatattggccaccaccaatcgtgatttgcaggaacaggtagccaacggc
cggttccgagaggatctttattatcgtctaaatgttttccccctgtatttacctcctctg
cgggaacgcagcaaagatatcttaccccttgcccgacgcttggctgccgcccgtgcggca
gaaaatggccgcgttttatcccgcttttctttggctgctgaaaaaaaattactggcctat
ccatggccgggcaatattcgtgaattggacaacgttatccagcgggccatgattttagcg
gatgaggatgaattaacgctccagtcgctggtttttgatgcaggaatatgggcaaccccc
atttcaggtgaagctagagagcttaataaaaatctcaaagaccatgaaaaacagtttatt
ttggaaaccttgggacagtgcaatgggcggcggaaacaggcagccgttcggctaggagtt
agtgagcgaaccctacgttataagttagctcggctacgggaggcaggcgtcgttatccct
gattttcctagttcaaggcttgcgtgttaa
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