Nitrosococcus oceani: Noc_2475
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Entry
Noc_2475 CDS
T00281
Name
(GenBank) Histone-like DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
noc
Nitrosococcus oceani
Brite
KEGG Orthology (KO) [BR:
noc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
noc03032
]
Noc_2475
03036 Chromosome and associated proteins [BR:
noc03036
]
Noc_2475
03400 DNA repair and recombination proteins [BR:
noc03400
]
Noc_2475
DNA replication proteins [BR:
noc03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Noc_2475
Chromosome and associated proteins [BR:
noc03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
Noc_2475
DNA repair and recombination proteins [BR:
noc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
Noc_2475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
Sigma70_r3
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
ABA58928
UniProt:
Q3J8B8
LinkDB
All DBs
Position
complement(2819649..2819978)
Genome browser
AA seq
109 aa
AA seq
DB search
MKKVILSLILMMVSLSVYGVGDKELAGRIAKQTGMAPDQIEEVLVAFKKQIIADLASGQE
VRLSHFGKFYAKHMNAREARNPRTGEAIQVPPRSYLRFKAFDTGNSRLN
NT seq
330 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaggttatcttgtcccttattttgatgatggtttcgctttctgtctatggggtt
ggcgataaggaattggcagggcgcattgcaaagcaaacaggtatggcaccagaccagatt
gaagaagttcttgttgccttcaagaagcagataattgccgatttggcctctgggcaggaa
gtgcgcctcagtcattttggtaaattctatgctaaacacatgaatgcccgcgaggctcgt
aatcctagaacgggagaagctattcaggtcccccctcgtagttacttacgttttaaggcg
ttcgatacaggtaatagccgcctcaattga
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