KEGG   Nitrosococcus oceani: Noc_2750
Entry
Noc_2750          CDS       T00281                                 
Name
(GenBank) CRISPR-associated helicase, Cas3 family
  KO
K07012  CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
Organism
noc  Nitrosococcus oceani
Brite
KEGG Orthology (KO) [BR:noc00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:noc02048]
    Noc_2750
Enzymes [BR:noc01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Noc_2750
Prokaryotic defense system [BR:noc02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Type I signiture cas proteins
    Noc_2750
SSDB
Motif
Pfam: Cas3_I-F_Cas2 Cas3-like_C_2 DEAD ResIII
Other DBs
NCBI-ProteinID: ABA59199
UniProt: Q3J7J7
LinkDB
Position
complement(3119234..3122734)
AA seq 1166 aa
MIILFVSECEKAAWKRSRRILSRYAVQIGRRTWLARISAEGLQNIRRELTQAASRHTSVA
CHRVKGRYQTELAWVVGSRRHFSRNGEFAFSHSATPLPSVNEEAAPAVRLLNHLCILAGL
FHDLGKHGACFQRKLRDENSNQSDPVRHERISLLLLLRLIILTALPAAEDNPPPVEPTPK
RRRRRVAGANHNLSKPALGLASLKDEQWLAALTDSKKIYEALHRIWKETSHDHWRELIPI
EGSTLRPQWSSAEGDRGLAPLLSVLCFLIISHHKLPDGHEDSFAPLEETYLNRSQELQDG
LRLATDYRPAWSQSPRWVNEITKHARRARYLLQEHALPIRDRVLWYSAARYMARCALVLA
DHSISSQAKRELPVPSQSAQAQVCFANSQQGQLRQTLAAHLERVGKLSGKAFNQLHQLQH
NRKASTIETSPPALTVPIKEEAFSWQQKAERKVLQIQRQEDNAKEGFFALVMAETGSGKT
RGNARILAAANRHQNYRLTVALGLRTLTLQTGDEYRDDLGFGKMPDAVGDQCAIMVGGAL
TTALHEMANAGEEAGAEKGNHLFSQEEQAGVESSALDDSLYEGITGEFDFDYDPDAPWPE
DIIAPNNPKLNHLLQVPVLVCTIDHLMPFLQSQRASAAVLGFRMAGSDLIIDEIDSFSAE
DLPALLKLAYVVGFNGRKLLLSSATLPPATARAFYRAYQTGFNRWRQLQGMESGPIRCGW
FSHHAAHIKLASVADHAAFTKQHDRFIQALLNTLQQQPARRRLDTVLIPIAEGPAAVYQN
IMESCRELHQQWASHDPESGVRYSIGCVRWSNVAHTCGFAKHWLNMPANLDDIQVKLICY
HAKHLPLIRHHIEQTLNTLLKRKEGRQAHDHPTLRAHLENCRQQGKTHLLVIVSTSPISE
VGRDHDYDWGIVEPNSYWSLIQMAGRIWRQRRHWEARQPNMRIMSQTMRGLNKQPMRFTK
PGPESKHFKLSDRAETLAQIFDLESLQESIDARFTLQEPLIQAEKIKNQYIYPDMRQLEH
GQLQRLLESTEQSKQAMSFIEGARPQMVLTQRHSQCCPFRKDQNPNLLWFDREDDGVWKY
LDKKEKKAKNVKDKVHEKRNYPCLAQSYFSPDELSRDSLHEKWREQLARRGVTDSHTINA
LPLSIGDNFEQGKQLYYSDIIGWIFS
NT seq 3501 nt   +upstreamnt  +downstreamnt
gtgattattttattcgtcagcgaatgcgaaaaagctgcctggaaacgctcgcgccgcatt
ctatctcgctatgcggtgcaaatcgggcggcgcacttggctagcacggattagcgcggaa
ggtttgcaaaacatacgccgggaattaactcaagcggccagccggcatacttcggttgcc
tgtcatcgcgtcaaggggcgctaccaaacggagttggcctgggtggtgggcagccgccgg
cattttagccggaatggtgagtttgccttcagccatagcgcaactcctttgccaagcgtt
aacgaagaggccgcgcccgccgtgcggctacttaatcatctttgtatattggccgggctt
tttcatgatctggggaaacatggcgcttgctttcagcgcaaactacgggatgaaaacagc
aaccaaagcgatcccgtgcgccacgagagaatatcgcttttgctgctgttgcggcttatc
attttaactgcgctacctgccgccgaggataacccaccaccggtcgagcctacccccaaa
agacgccggcgccgggttgccggcgctaatcataacctctccaaacctgcccttggtttg
gccagtcttaaagacgagcaatggctcgcggcgcttaccgactccaaaaaaatttatgaa
gccctgcatcggatatggaaggaaacgtcccatgatcactggcgggaactcatacccatt
gaagggagcacgttacgcccacaatggagttcggcagaaggtgatcggggtttagcgcct
ttgctaagcgtgctctgttttttgatcatatctcatcataaattaccggacggacatgaa
gatagctttgcgccgctggaggaaacctaccttaacagatctcaggaattgcaggatggg
ctacggctagccacggattatcgtcccgcctggtcacagtcgccaagatgggtcaatgag
attaccaaacatgcccggcgtgcccgttacctcttacaggaacacgcgcttcctatccgg
gatcgcgtgctttggtatagcgctgcccgctatatggctcgctgcgccctcgttttggcg
gatcacagcatttccagccaggcgaaaagggaactccccgtcccatcccaatcagcccag
gcgcaggtttgtttcgccaacagccaacaagggcaattacgacaaacgctggccgcccat
ttggaacgagtcggcaaactttcgggaaaagccttcaaccagctgcatcaacttcagcat
aatcgtaaagccagcaccattgaaacctctccccccgccctgaccgttccaattaaagaa
gaagcctttagctggcagcaaaaagccgaacgcaaagtgctccaaatccaacggcaagaa
gataacgccaaggaaggctttttcgcgctcgtgatggccgaaaccggctctggcaaaacg
cggggtaacgcccgcattctggctgccgctaaccgccatcaaaattatcggttaacagtt
gctttgggactgcgcaccttgaccttgcaaactggcgatgaataccgtgatgatttgggg
tttggcaagatgcctgatgccgtaggggatcaatgcgcgatcatggtgggtggcgcttta
acgaccgcccttcatgagatggcgaatgctggggaagaggcaggcgccgaaaaaggaaac
cacctgttttcccaggaagaacaggccggcgttgaaagcagcgccctggacgactccctg
tatgaaggaatcaccggcgaatttgatttcgattacgatcctgacgccccctggccggaa
gatataatcgcgcccaataatcccaaacttaatcacctgttacaagttcctgttctggtc
tgcactatcgatcacttgatgccgtttctgcaaagccagcgggcatcagcggccgtcctg
ggttttcgcatggcgggatcagacttgattattgacgaaatcgacagcttttccgccgag
gatttgcccgcattattaaaacttgcctatgtggtgggtttcaacgggcggaaattgctg
ctttcttccgctaccttgccaccggccaccgcacgcgctttctaccgcgcctaccaaacc
ggctttaatcgttggcggcaacttcaaggcatggaatcgggtcctatccgctgcggttgg
ttcagccatcatgccgcccatatcaaattagcctctgtcgctgatcatgctgcttttacc
aagcaacatgatcgatttatccaggccctgttgaatacgctacagcaacaacccgcgcgg
cggcggttggataccgttctcatacccattgctgaaggaccggcagcagtttatcaaaac
ataatggagagttgcagggaattgcatcaacagtgggcgagccacgatccggaaagcggc
gttcgctattccatcggctgcgttcgctggagcaatgttgcccatacctgcggatttgct
aagcactggcttaatatgcctgctaatttagatgatattcaggtaaagctgatttgctac
catgccaaacatttaccgctcatccgccatcacattgaacaaacattaaatactcttttg
aagcgtaaagaagggcggcaagcgcatgatcatccaactttgcgcgcccatttagaaaat
tgtcggcaacagggaaaaactcacttactggttattgtgagcacctctcccatatcggaa
gtgggacgggatcacgactatgactggggaattgtcgaacccaattcttactggtccttg
attcaaatggccgggcgcatttggcggcaacggcgacattgggaagcccgtcaacccaac
atgcggataatgagccaaaccatgcggggcttaaataagcaacccatgcgctttaccaaa
cccgggccggagtctaagcactttaaactatctgacagggccgagacattagcgcagata
tttgatctggagagcttgcaagaaagtattgatgcccgctttacgctccaagaaccgctg
attcaagctgagaaaatcaaaaaccagtatatttatcccgatatgcgccagcttgaacat
ggtcagttacagagacttttggaaagtaccgagcagtcaaaacaggctatgtcttttatt
gaaggcgctcgtccgcaaatggtattgacccaaagacatagtcagtgttgccctttccga
aaagatcaaaatccgaacttgctctggtttgatcgggaagacgacggtgtctggaaatat
cttgataagaaagaaaaaaaagctaaaaacgtaaaggataaagttcatgaaaaacgcaac
tacccatgccttgcgcaatcttatttctcccctgacgaactttcccgggattccttacat
gaaaaatggcgggaacaattagcccggagaggtgtgactgactcccataccattaacgcg
ctgcccctatccatcggggataatttcgaacaaggaaaacaactatattatagtgatatt
atcggctggattttttcttaa

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