KEGG   Nitrosococcus oceani: Noc_2814
Entry
Noc_2814          CDS       T00281                                 
Name
(GenBank) DNA polymerase III, epsilon subunit
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
noc  Nitrosococcus oceani
Pathway
noc03030  DNA replication
noc03430  Mismatch repair
noc03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:noc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Noc_2814
   03430 Mismatch repair
    Noc_2814
   03440 Homologous recombination
    Noc_2814
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:noc03032]
    Noc_2814
   03400 DNA repair and recombination proteins [BR:noc03400]
    Noc_2814
Enzymes [BR:noc01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Noc_2814
DNA replication proteins [BR:noc03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     Noc_2814
DNA repair and recombination proteins [BR:noc03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     Noc_2814
SSDB
Motif
Pfam: RNase_T RNase_H_2 DNA_pol_A_exo1
Other DBs
NCBI-ProteinID: ABA59261
UniProt: Q3J7D5
LinkDB
Position
complement(3190804..3191535)
AA seq 243 aa
MRQIILDTETTGLEPKEGHRIIEIGGVELSCRRRTGRTFHCYLNPEREVDKGALKIHGLS
NEFLSDKPRFIEIAEEFLAFIEGAELVIHNAPFDVGFLDHELCLLGSKWGKISTDCQVLD
TLQLARQRHPGQKNNLDALCKRYGIDNSRRDLHGALLDAEILAGVYLAMTGGQVSLSLHE
YGDNGLPFRVGGGNYRPVSAERASLTIARASREERMAHDARLTAIDKASGGACLWRQLDS
SPD
NT seq 732 nt   +upstreamnt  +downstreamnt
atgcgtcagattatactcgataccgagaccactggattggaacctaaagaggggcaccga
atcattgagattggcggtgttgaactgagctgccgacgccgcacgggacgaacttttcat
tgttatctaaacccggaacgggaggtagataaaggagcgttgaaaatccatggcctgagc
aatgaatttctgtccgataaaccccgttttatagagattgccgaagaatttttagcgttt
attgaaggggcagagttggtgattcataatgcccctttcgatgttggttttttggatcat
gagttgtgtttgctcggttctaaatgggggaaaataagcactgattgccaagtgttggac
acattgcagctagcgcggcagcgtcatcccggccaaaaaaataacttagatgctctttgc
aagcgctatgggatcgacaactctcgtcgggatctgcatggtgctctcctcgatgcggaa
atcctggccggagtatatttagccatgacgggtggccaggtcagtttaagtctgcacgag
tatggtgacaatggccttccatttcgtgtaggaggggggaattatcggcctgtttctgcc
gagcgagcgtcacttacgatagcgcgggcaagcagagaggaacggatggctcatgacgct
cgtcttacggctattgataaggcaagtggcggcgcttgtttgtggcgccagcttgattcg
tcgccagattaa

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