KEGG   Nitrosococcus oceani: Noc_2909
Entry
Noc_2909          CDS       T00281                                 
Name
(GenBank) Type I site-specific deoxyribonuclease HsdR
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
noc  Nitrosococcus oceani
Brite
KEGG Orthology (KO) [BR:noc00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:noc02048]
    Noc_2909
Enzymes [BR:noc01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     Noc_2909
Prokaryotic defense system [BR:noc02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   Noc_2909
SSDB
Motif
Pfam: SWI2_SNF2 HSDR_N ResIII T1R_D3-like T1RH-like_C Uteroglobin Helicase_C
Other DBs
NCBI-ProteinID: ABA59355
UniProt: Q3J741
LinkDB
Position
3287993..3291121
AA seq 1042 aa
MVVLPAGFISVRTTTENFGRRLGVFQDELDKVETPAIAQLQRLGWRYVRGVELSPEAAGA
ERAYYRDVVLVGRLEGAIRRINPWLSEENLRKVAREITHPNHVGLMEYNHAIYQMLVNYL
SIEQDLGKGRKGQTVKIIDFENPGNNEFLCVNQFKVEGLNQNIIPDIVCFVNGLPLAVIE
CKSPYVADAISEGIKQLRRYANLRYPETDEGAQKLFWYNQLMITTCRDQAKVGTISSSAQ
HYGEWKDAYPFTDGDIRAHPFSPGGKYEVREMAPPLWYAGEFEQASPVTPQQRLLAGMLD
PGNFLDLLQNFTIFEAVEGRLVKKVARYQQYRAMNKVIKRLKSGTDRKEKSGVVWHTQGS
GKSLTMVMLAVKMRRDPALQQYKLVFVTDRTQLDTQLSNTFRGAQNETVYNAGSVAELKT
LLSRDSSDIVTATVQKFQDAEAAGGFKDLNPSGKIIVLADEAHRTQFGGLAMTINAALPK
APKIGFTGTPLLKTQKMDQAFGGYIDQYKINEAVEDGATVRIIYEGRQVQSDVVGDSLDA
LFEAYFQGCSDEEKRAIKQKYGVEWAVREAPARIRWVCIDLLKHYREHIQPNGFKAMIVV
GSRHAATVFKQTLDELDAPPSEVIISGKHNDPATLAQYTDRVHQKQAIQNFTKPLGEDPT
AFLIVKDMLLTGFDAPIAQVMYMDRSLKDHALMQAIARVNRTCKGKQAGFIVDYHGLSDD
LTEALNQFSSEDVQGTYHTLKDEIPKLKAAHTRVAAIFAGVKGADVDDYVLRLKDEDTRQ
QFERGFKRFAKQMDVILPDVAAKPYVPDLKFWGKVQNAARNRYRDPGLNILDAGEKVRKL
VEEHIISTGVDPKIPPVDLMAANFRESVEQIKSPESRASEIESAIKHHLIVNLEEDPEFY
KSLSLRLREIIEKTNGKWEQQLELLLQMVDNIETEHKQAADEVGLTKTEFAFYNILMAEV
TRHGGDGLVGDEVHEDIKATSQFLVKTFDEATQIVDFFHKPDEVKRMKKEIKRAILDCSY
ADKALVTVVQERFMDLAKRKFG
NT seq 3129 nt   +upstreamnt  +downstreamnt
atggtggtcctaccggcaggttttatatccgtgcgtacaactacggaaaatttcgggaga
agattaggcgtgtttcaggacgaactcgataaagtagaaacccccgccattgcccagttg
caacggctaggctggcgctatgtccgtggcgttgaactgtcaccggaggctgcgggcgcg
gaacgggcctactaccgggacgtggtgttggttggccgtctggaaggggctatccggcgc
atcaacccttggctcagtgaggaaaacctgcgtaaggtagcgcgggaaatcacccacccc
aaccatgtgggtttgatggaatacaaccatgccatttaccagatgttggtcaattacctg
tctatcgaacaggacttgggcaagggacgcaaggggcagacggtcaaaattattgatttt
gaaaatcccggtaacaatgaattcttgtgcgttaaccagttcaaggttgaaggactcaat
cagaatatcattcccgatatcgtctgctttgtgaatggtttgccgttggcggtgattgaa
tgcaaatccccttacgtggcggatgccattagcgaaggtattaagcaacttcgccgctat
gccaaccttcgctatccggaaaccgatgaaggggcgcaaaagctattctggtacaaccag
ctaatgatcaccacctgccgggatcaagccaaggtgggcaccatcagttccagtgcccag
cattacggggaatggaaagacgcctacccctttaccgatggggacatccgtgcacatccc
ttcagccccggtggcaaatacgaggtacgggaaatggcgccaccgctctggtatgccggt
gagtttgaacaggccagccccgtcacgccccaacagcgcctgctggcgggtatgttagat
cccggcaactttctcgacctgctccaaaacttcaccatcttcgaagccgttgagggtcgc
ctggtcaagaaggtggcccgctatcagcaataccgcgccatgaacaaggtcatcaaacgc
cttaaaagcggcacggatcgtaaggaaaagtccggggtggtgtggcatacccaggggtcg
ggcaagtccctgaccatggtgatgctggcggtgaagatgcgccgtgatccggcgttacag
caatacaagctggtgttcgtcaccgaccgcacccaactggatacccagttgtccaatacc
tttcgcggcgcccagaacgaaacggtctacaacgcgggctccgtggcggagttgaaaacc
ctgttgagccgcgattcgtccgatatcgtcaccgccacggtgcagaaattccaggacgcg
gaagcggcaggcggcttcaaagacctgaaccccagcggcaagatcattgtgctggcggac
gaggcccaccggacccagtttggcggcttggccatgactatcaatgccgccttgcccaag
gcccccaagattggttttaccggcacaccgctattgaagacccaaaaaatggatcaagcc
ttcgggggctatattgaccagtacaagatcaacgaagccgtggaagacggcgccacagtg
cgcatcatctacgaaggtcgacaggtgcaaagcgatgtggtgggcgattcattggatgcc
ctgtttgaagcatacttccaagggtgcagtgatgaagaaaaacgggcaatcaaacaaaaa
tatggggtagaatgggcggtacgggaggccccggcaaggattcgctgggtctgtattgat
ctgctgaagcactaccgtgaacacatccagcccaacggtttcaaggccatgattgtggtg
ggcagtcgccatgccgccacggtattcaagcaaaccctggatgagctggacgcgccgccg
tcggaggtgattatttccggcaaacacaatgacccggcaacccttgcccagtacacagac
cgggtccaccagaagcaggcgattcaaaactttactaagcccctgggggaagaccccacc
gcctttctcatcgtcaaggacatgctgctcaccggcttcgatgcgccgatagcgcaggtc
atgtacatggatcgcagcctgaaagatcacgcgctgatgcaagccattgcccgggtgaac
cgtacctgcaaggggaagcaggcggggtttatcgtagattaccatggcttgtctgatgac
ctgaccgaagccctcaaccagttcagcagcgaagatgtgcaaggcacctaccatacgctg
aaggacgaaatacccaagctgaaagctgctcatacccgtgtggccgccatctttgccggg
gtgaaaggcgcggatgtggatgattatgtgctgcgcctgaaggatgaagacacccgccag
caatttgaacggggcttcaaacgcttcgccaagcaaatggacgtgatactgccggatgtg
gctgccaagccctatgtgccagacctgaagttctggggcaaggtacagaacgctgctcgt
aaccgctaccgcgaccctggtttgaatattctcgacgccggtgaaaaggtgcgcaagctg
gtggaagagcacatcatcagcaccggcgtagaccccaagataccaccggttgatctgatg
gcggcaaatttcagggaatcggtagagcagatcaagtcgccggaatcccgtgcctctgaa
attgaaagcgccatcaagcaccatcttatcgttaaccttgaggaagaccccgagttctat
aagtcgctgagcctgcgtctacgggagatcatcgagaaaaccaatggcaaatgggagcag
caattggaattgctccttcagatggtcgataacatcgaaaccgaacataagcaggcagcg
gatgaggttggtctcaccaaaacggaattcgccttctataatattctcatggctgaggtc
actcggcatggtggtgatggattagtcggcgatgaagttcatgaggatatcaaagcaacc
agccaattcctggtgaagacctttgatgaggcaacccagatcgttgatttcttccacaag
cccgatgaagtgaagcggatgaaaaaggaaatcaagcgggcgatactggattgttcctac
gcggataaagcgcttgtgaccgttgtgcaagagcgctttatggacttggctaagcgaaag
ttcggataa

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