Nitrosococcus oceani: Noc_2921
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Entry
Noc_2921 CDS
T00281
Name
(GenBank) Chaperonin Cpn60/TCP-1
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
noc
Nitrosococcus oceani
Pathway
noc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
noc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Noc_2921
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
noc03019
]
Noc_2921
03110 Chaperones and folding catalysts [BR:
noc03110
]
Noc_2921
03029 Mitochondrial biogenesis [BR:
noc03029
]
Noc_2921
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
noc04147
]
Noc_2921
Enzymes [BR:
noc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Noc_2921
Messenger RNA biogenesis [BR:
noc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Noc_2921
Chaperones and folding catalysts [BR:
noc03110
]
Heat shock proteins
HSP60 / Chaperonin
Noc_2921
Mitochondrial biogenesis [BR:
noc03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Noc_2921
Exosome [BR:
noc04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Noc_2921
Exosomal proteins of other body fluids (saliva and urine)
Noc_2921
Exosomal proteins of breast cancer cells
Noc_2921
Exosomal proteins of colorectal cancer cells
Noc_2921
Exosomal proteins of bladder cancer cells
Noc_2921
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Phage_GP20
Motif
Other DBs
NCBI-ProteinID:
ABA59367
UniProt:
Q3J729
LinkDB
All DBs
Position
complement(3304016..3305680)
Genome browser
AA seq
554 aa
AA seq
DB search
MAAKDVRFSEDARHRMMHGVNVLADAVRVTLGPRGRNVVLEKSFGAPTITKDGVSVAKEI
ELKDRFENMGAQMVKEVASQTSDVAGDGTTTATVLAQSILREGMKAVAAGMNPMDLKRGV
DKAVVAAVEELKKLSKPCEDSKAIGQVGTISANAEESVGKIIAEAMDKVGKEGVITVEEG
SGLDNELEVVEGMQFDRGYLSPYFITDQQSMAADLDDPYILIHDKKISNIRDLLPVLESV
AKAGKPLLVISEDVEGEALATLVVNTIRGIVKVCAVKAPGFGDRRKAMLEDIAVLTGGTV
ISEEVGLSLDKVTLDDLGRAKKITVNKENTTIVDGAGSADDIKARVEQVRIQIEEATSDY
DKEKLQERVAKLAGGVAVIKVGAATEMEMKEKKARVEDALHATRAAVEEGVVPGGGVALI
RALLGIKDLKGANHDQDVGINIARRAMEEPLRQIVNNSGEEASVIVNQIKGGEGNYGYNA
ATGEFGDMIAMGILDPTKVSRTALQNAASVAGLMITTEAMIAEAPKDEEASPGGAPGMGG
GMGGMGGMGDMGMM
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaagatgtaagatttagcgaagatgcacgccatcgcatgatgcatggcgtc
aatgttttggccgatgcggtacgggtcaccttgggccccagggggcggaatgtggtgctg
gagaagagctttggcgcacccaccattaccaaggacggcgttagcgttgccaaagaaatt
gaacttaaggataggttcgagaacatgggcgcccagatggtcaaggaagtggcttcccag
acttccgatgtggcaggagatgggaccaccacagcaactgtgctggctcagagcatactg
cgcgagggtatgaaggcggtggccgctggcatgaaccccatggatctcaaacggggcgtt
gacaaggcagtggtggctgcggttgaagaactgaaaaaactctccaagccctgcgaggat
agcaaggctatcggccaggtgggcactatctccgccaatgcggaagagtccgtgggtaaa
atcattgccgaagccatggataaggtaggtaaggaaggcgtgattacggtggaggaaggt
tctggcttggataatgagctggaagttgtggaaggaatgcagtttgatcggggttatctc
tcgccctatttcatcaccgatcagcagtccatggcggcggatctggatgatccttatatc
cttattcacgataaaaaaatctccaatattcgcgacttgctgccggtgctggaaagcgtg
gccaaagcgggtaagccgttactggtgatttctgaggatgtggaaggcgaagcgctggcg
accctggtggtcaataccatccgcggtatcgttaaagtgtgcgcggtcaaggcaccaggc
tttggtgatcgccgtaaggccatgctggaagatatcgccgtgctgactggcggcacggtc
atttccgaggaggttggtctttccctggataaagtgaccctggatgatttgggtcgggcc
aagaaaatcaccgttaataaggaaaacaccaccatcgtagatggtgcgggtagtgctgac
gatattaaagcccgggtcgagcaagtccggatacagattgaggaagccacttccgattac
gataaagagaagctccaggagcgggttgctaaattggcaggtggcgtggccgtcatcaag
gtgggcgccgcgaccgaaatggagatgaaagagaaaaaggcccgtgtggaagacgctctg
cacgccacccgtgcggcggtagaagaaggcgtggtccctggtggtggggtagcgctgatt
cgggctctattaggtattaaggatcttaaaggtgcgaatcatgatcaagatgtgggcatt
aatattgcccgtcgcgccatggaagaacctctgcgccagatcgtgaacaattctggggaa
gaggcttctgtcatcgttaaccagattaagggaggcgagggtaactacggttacaatgcc
gccaccggagagtttggcgacatgattgccatgggaatcctggaccccaccaaggtcagc
cggacggccctgcaaaatgctgccagcgtggcgggtctgatgatcaccaccgaggcgatg
attgccgaggcgccgaaggacgaggaggcatctcctggcggtgcgcctggcatgggcggc
ggcatgggtggtatgggcggcatgggtgatatgggcatgatgtaa
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