Nitrosococcus oceani: Noc_2950
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Entry
Noc_2950 CDS
T00281
Name
(GenBank) ABC efflux pump, fused ATPase and inner membrane subunits
KO
K06147
ATP-binding cassette, subfamily B, bacterial
Organism
noc
Nitrosococcus oceani
Brite
KEGG Orthology (KO) [BR:
noc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
noc02000
]
Noc_2950
Transporters [BR:
noc02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
Noc_2950
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_21
ABC_ATPase
RsgA_GTPase
AAA_29
AAA_22
AAA_16
AAA_15
MMR_HSR1
AAA_24
AAA_25
AAA_23
Motif
Other DBs
NCBI-ProteinID:
ABA59395
UniProt:
Q3J701
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All DBs
Position
3335831..3337600
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AA seq
589 aa
AA seq
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MINHQSSIRPRWQTMKMAAIFIAPYKWQVFYSLIALVFTAAITLSIGQGIRLLIDRGFAT
HSTDILTQYVSIFFLLVIALAIGTFTRYYWVTWLGERVIADIRRRVFDHLIDLHPGFFEK
NRSLEIQSRLTADMTLLQSVIGSSVSFALRNFIMMVGGIIWLFITNAKLTAIVMICVPLV
VMPILIFGRRVRKLSRQSQEKVAIVGAYIGEILGQIKTVQAYNHQEIDKKNFHYHVEEAF
TVAKNRIIQRALLVTLVIILVLGAVGLMLLIGGMDVIDGKISGGELAAFVFYSVIVGSAV
ASISEVIGELQRAAGAAERTIDLLATPNEIQSPSKPQTLPPVSGNIEIEHLIFAYPSRPD
VRVINELSLTIKAGETLALVGPSGAGKSTLFDLLLRFFDTYTGSIKLEGIDIRQLNISKL
RQCFALVSQNPALFHGSIIDNLRYARPDALDTEVEAVAKAAHAHEFICKLPQGYDTQLGD
AGLGLSGGQKQRLAIARAILANAPILLLDEATSALDSQSEFWVQQALEKLMVNRTTLVIA
HRLSTVKTADRIAVLDQGRLEALGSHAELMKCSELYSQLATLQFQHNLH
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgatcaatcatcaatcttcaattcgtcctcgttggcaaaccatgaaaatggcggcaatc
tttattgctccttacaaatggcaggtattttacagtctaatcgccctggtgttcacggca
gcaatcacgctttccattgggcaaggcatccgcctgttgattgatcgtggttttgcaacc
cattcgacggatatattaacccaatacgtttccatattttttttattagttattgccctt
gcgataggcactttcacacgctattactgggtgacatggctaggcgagcgggttatcgcc
gatattcgccgtagagtatttgaccaccttatcgatctgcaccctggtttttttgaaaaa
aaccgcagccttgaaattcagtcacgattaacggccgatatgacattgctccagtcagtg
attggatcatcggtatcattcgccttgcgtaattttattatgatggtcggtggcattatt
tggctattcatcaccaatgcaaaactaaccgccattgtcatgatttgcgtgccactggta
gtcatgcccattttgatattcgggcggcgggtacgcaagttatcgcgtcaaagtcaagaa
aaagttgctattgtaggcgcttatattggcgagatacttggacaaatcaaaacggtacaa
gcttacaaccatcaggaaatagataaaaaaaatttccattatcatgttgaagaggctttt
accgtcgctaagaaccggatcatacaacgtgcgctactggtcaccctggttattattctg
gtattaggcgctgtcggtttaatgctattaattggtggtatggatgtcattgacggaaaa
attagcggtggcgagcttgccgcttttgttttttacagtgtcatcgtgggttcagccgtc
gcttctatctcagaggttatcggtgaactacaacgtgcggctggtgccgctgaacgcact
atagatttattggctacgccaaacgaaatacagtctccatctaaaccgcaaacactgcca
ccggtctcgggtaatatcgagattgaacacttaatctttgcctatccttcacgtccagac
gtccgtgtaatcaatgagctatcactgaccatcaaagcaggggaaaccctagcattggtg
ggtccttcaggcgcgggcaaatcaaccttatttgatttattattacgtttctttgacacc
tacacgggttccatcaagctagagggtatcgatatccggcagctcaatatctccaagctg
aggcaatgctttgcgctggtatcccagaatccagctttatttcatggcagtatcatagac
aatctccgctatgcccgacccgatgcgctcgataccgaagttgaagccgtggcaaaagcg
gcccatgcccatgagtttatttgtaaactgccgcaaggttatgatacccagctaggagat
gctggattaggactatcggggggccaaaaacaacggcttgccattgcgcgggcaatactg
gcgaatgcccctattttattactggacgaagcaaccagcgcgttagattcgcaaagtgaa
ttttgggttcagcaagcgctggaaaaattaatggttaaccgtaccacactggtcattgct
catcgactatcaacggtaaaaacagctgatagaattgccgtccttgatcaaggacggctg
gaagctttgggttcccatgcggaactaatgaaatgcagcgagctatattcacagctggca
accttgcagtttcagcataacttgcattaa
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