Nocardioides sp. JQ2195: ncot_03975
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Entry
ncot_03975 CDS
T10874
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
noca Nocardioides sp. JQ2195
Pathway
noca03420
Nucleotide excision repair
noca03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
noca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ncot_03975 (pcrA)
03430 Mismatch repair
ncot_03975 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
noca03400
]
ncot_03975 (pcrA)
Enzymes [BR:
noca01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ncot_03975 (pcrA)
DNA repair and recombination proteins [BR:
noca03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ncot_03975 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
ncot_03975 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
DEAD
ResIII
CarD_TRCF_RID
Motif
Other DBs
NCBI-ProteinID:
QIX25846
UniProt:
A0A6H0ZYG7
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All DBs
Position
840254..842713
Genome browser
AA seq
819 aa
AA seq
DB search
MSSSFPIPGLESVEPARTPSNEALLDGLNEPQRAAVIHAGRPLLVVAGAGSGKTRVLTRR
IAWLIRERKAHPGSILAITFTNKAAAEMKERVEDLVGKRARIMWVSTFHSACVRILRKEI
DKLNVDGRGYKSSFSIYDAADSKRLMTLVCQDLDLDPKRYQPRAVLNWVSNQKNELKDPD
DAAKDTKNSFEESYAAAYALYQRRLRDANAVDFDDIIMLTVHIFQAFPEVREVYRRRFRH
VLVDEYQDTNHAQYALIGQFCADDPEGDVHGFESGGERVEPAELMVVGDADQSIYAFRGA
NIRNILDFEEDFPDATSILLEQNYRSTQTILEAANSVIGNNAGRKPKRLWSQAGDGAKII
GYVADDERDEARFVSEQIDKLTDTGDARPGDVAVFYRTNAQSRVFEEVFIRTGQPYKVVG
GVRFYERKEVRDALAYLRLLANPADEISLRRVLNTPKRGIGDRAEACVSAYAERERILFW
EALRRADEAPGIATRSLNAIRGFVGMVEELQSMVDAGERPDVILESVLERSGYLAELEAS
DDPQDETRVENLAELVAVAREFSDDPIAGPSADPADPDDTVAGTEKPGLGDFLERVALVA
DADQIPPPPEEGDQADEADTQGVVTMMTLHTAKGLEFPVVFLTGMEDGVFPHMRSLGDKP
ELEEERRLAYVGVTRARERLYLSRAVMRSAWGAPSHNPASRFLDEIPATLVDWKRTAGAQ
TSWNRPNFGSSPGIDFGAPTAAGRRNFGSAAARLDASKKAKPARDIPSLDPGDRVVHDSF
GLGTVVSVEGAADKAVASIDFGSEGIKRLLLRYAPVEKL
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atgagttcttcattcccgattcccggcctcgagtccgtcgagcctgcccggacgccgtcc
aacgaggccctgctcgacggcctcaacgagccgcaacgagcggcggtgatccacgccggg
agaccactcctcgtggtcgccggtgccgggtccggcaagacccgggtgctgacccgccgc
atcgcctggctgatccgcgagcgcaaggcccacccgggctcgatcctggcgatcaccttc
accaacaaggctgcggcggagatgaaggagcgcgtcgaggacctggtcggcaagcgcgcc
cgcatcatgtgggtctcgacgttccactccgcctgcgtgcggatcctgcgcaaggagatc
gacaagctcaacgtcgacggccggggctacaagtcgagcttctccatctatgacgcggcg
gactccaagcgactgatgaccctggtctgccaggacctcgatctcgaccccaagcgctac
cagccgcgcgccgtcctcaactgggtctccaaccagaagaacgagctcaaggaccccgac
gacgccgcgaaggacacgaagaacagcttcgaggagtcgtacgccgcggcgtacgccctc
tatcaacggcggctgcgcgacgcgaacgccgtcgacttcgacgacatcatcatgctcacg
gtgcacatcttccaggcgttccccgaggtgcgcgaggtctatcgccgtcgcttccgccac
gtgctcgtcgacgagtaccaggacaccaaccatgcgcagtacgcactgatcggccagttc
tgtgccgacgaccccgaaggtgacgtccacgggttcgagtccggtggcgagcgggtggag
ccggccgagctgatggtggtcggtgacgccgaccagtcgatctatgcgttccgcggtgcc
aacatccgcaacatcctcgacttcgaggaggacttccccgacgccacgtccatcctgctc
gagcagaactaccggtccacgcagacgatcctcgaggccgccaactcggtgatcggcaac
aatgccggtcgcaagcccaagcggttgtggtcccaggccggggacggcgcgaagatcatc
ggctacgtcgccgacgacgagcgtgacgaggccaggttcgtctccgagcagatcgacaag
ctcaccgacaccggtgacgcacggccgggagacgtggcggtgttctaccgcaccaacgcc
cagtcgcgggtgttcgaagaggtcttcatccgcaccggccagccctacaaggtggtcggc
ggcgtccggttctacgagcgcaaggaggtccgcgacgcgctggcctacctgcgcctgctc
gccaacccggccgacgagatctccctgcgccgggtgctgaacacccccaagcggggcatc
ggcgaccgggccgaggcctgcgtctcggcgtacgccgaacgcgagcgcatccttttctgg
gaggcgctgcgccgggccgacgaggcgcccgggatcgcgacccgctcactcaacgcgatc
cgtgggttcgtgggcatggtcgaggagctgcagtcgatggtcgacgccggggagcggccc
gacgtgatcctcgagtcggtgctcgaacgctccggatacctcgctgagctcgaggcgtcc
gacgacccgcaggacgagacccgtgtggagaacctcgccgagctcgttgcggtggcccgt
gagttctccgacgacccgatcgccggcccctcggccgacccggccgatccggacgacacc
gtcgccggcaccgagaagcccgggctgggtgacttcctggagcgggtggcgctggtcgcc
gacgccgaccagatcccgccgccgcccgaggagggcgaccaagccgatgaggccgacacc
cagggcgtggtcacgatgatgaccctccacaccgccaagggactcgagttcccggtggtg
ttcctgaccggcatggaggacggcgtcttcccgcacatgcgctcgctgggcgacaagccg
gagctcgaggaggagcgtcgcctcgcctacgtcggcgtcacccgggcccgggaacggctc
tacctctcccgagcagtgatgcgttcggcctggggtgccccctcgcacaaccccgcctcc
cggttcctcgacgagatcccggccaccttggtcgactggaagcgaactgccggtgcacag
acgtcgtggaaccgacccaacttcgggtcgtcgcccgggatcgacttcggcgcgcccacg
gcagccggacgccgcaacttcggcagcgccgccgcgcggctcgacgcgtcgaagaaggcg
aagccggctcgcgacatcccgtccctggaccctggtgaccgggtcgtgcacgactccttc
gggctcggcaccgtggtctccgtcgagggcgccgcggacaaggcggtcgcctcgatcgac
ttcggctccgaaggcatcaagaggctgctgctccgctacgcccccgtcgagaaactgtga
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