Nocardioides sp. JQ2195: ncot_04060
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Entry
ncot_04060 CDS
T10874
Name
(GenBank) ABC transporter ATP-binding protein
KO
K06147
ATP-binding cassette, subfamily B, bacterial
Organism
noca Nocardioides sp. JQ2195
Brite
KEGG Orthology (KO) [BR:
noca00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
noca02000
]
ncot_04060
Transporters [BR:
noca02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
ncot_04060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
AAA_29
SMC_N
AAA_25
Zeta_toxin
AAA_5
AAA_16
RsgA_GTPase
AAA_22
AAA_21
AAA_23
nSTAND1
Ploopntkinase3
DUF87
Motif
Other DBs
NCBI-ProteinID:
QIX25863
LinkDB
All DBs
Position
863028..866633
Genome browser
AA seq
1201 aa
AA seq
DB search
MTDTLTRPPERPQKTPLPVPPADPTRRVDWQRMRSPMAAGALLCAAIAAVSTTVGTVVIG
RLAEHPTSSLVGLLAGCVIGASLIDTFGKIVWVGLSDRAEGRLREDLLDAALGQPLATLS
EQAVGEILDRVDDDTHEVGNLIRWQLWMFARTVFGVVPMWIVAGLTWWPAWVLFPALGLV
TWLAIRSLLGEISRRKVIEEMAWTDHAAALEEGIAGRDDLRTSLGQAHVVKRVAGLSAVV
HERFRSVLDVERRLALRAGLLLHALLAGIGLAGIALAMNGDLSVARLVTLFLVTSTFVGQ
IAMLANHLPDLQAGLGAVIRLRQMLAVEPEPQGGRPVPEQAALELEIRDLAFAYDEGTFA
LRDINLFLPAGDTLALVGRTGSGKSTLASLVSRAVEPPRGTILLGGVDILDIDLQQLRAS
VGVVTQRTEILAGTLAENITLFGDVTRERVQQAVAELGLDGWVAGLPDGLDTLLGPGGTR
LSAGEEQLVAFARLLIRNVRVVVLDEATARMDPLTEHRVVAAADRLLRGRTGVLIAHRLS
TIERAPHVAVLDHGRVVQEGLRAVLAREPGAFRDLLHASRVEQRQQRRADDSIDGTTQDR
GDDEPVAHATLDDAMVGDPAGGSSVGGRRRVGPPPDVPDVGNGPSLARGIAHALSVRPTW
GIWGAALFLMISVIGAQGAITGLVWGRIVEDLQVGRSPGLLSVALVLCLLAMPFMLADAF
WRYPRWWIEVMLRVRMSVLHGQTSQQRLTRTPPGEVVARSMDADRYARYADRWVDFLNGM
IIAAFTALIAGTWIAGAVLLAVMVTSALASAVGRPIAGRSAAEASTARAGFGRALVSALE
SARTVKLAAATPAVRRHLRDVDSGRVAAAVKEHRVQAFLDGVPIVMVQCGVVTAWAVYFA
GGWSLAIALLVGNAVAGFDWFGRVAGMVVTEAPGTRAWQVETARFAGGVDLMDLPPGVDL
VSGAAPDPEPVPRVPLDRLELRGFSAVHDDGTIGVSGVDLTVEAGELVLLVGQVGSGKSS
LLAALAGLIDYRGDVLWNHDVVRDPQRFLRPGQVSHVAQVPRVLSGTFNDNVRLGHDRAF
DAPVGVARLDADVEEAGGRDALVGHRGVRLSGGQVQRLALARALATDAELTLADDVSSAL
DASTEIELWRSLRERGATVIGATAKRAALSRADRVVVLVDGEVAEIGPWTQLAPRWGHLA
G
NT seq
3606 nt
NT seq
+upstream
nt +downstream
nt
atgacagacaccctcacgcggccgccggagcgcccccagaagacgccactgcccgtcccc
ccggctgatcccacccggcgggtcgactggcagcggatgcggtcgccgatggctgcgggt
gcgctgctgtgcgccgcgatcgcagcggtctcgaccaccgtgggcaccgtggtgatcggc
cgactcgccgagcaccccaccagctccctcgtggggctcctggcaggctgcgtgatcggt
gcgtccctgatcgacacgttcggcaagatcgtctgggtcggcctctccgaccgggcggag
ggccgcctgcgggaggacctcctcgacgccgccctggggcaacccctggccactctctcc
gagcaggccgtcggcgagatcctcgaccgcgtcgacgacgacacccacgaggtcggcaac
ctgatccgctggcagctgtggatgttcgcccgcaccgtcttcggagtggtgccgatgtgg
atcgtggccggcctcacctggtggcccgcctgggtgctcttcccagccctgggactggtc
acgtggctcgcgatccgttccctgctgggtgagatctcccggcgcaaggtcatcgaggag
atggcctggaccgaccacgcggcagcgctcgaggaaggcatcgcaggacgcgacgacctg
cgcaccagcctcgggcaggcacacgtcgtcaaacgagtggccggcctctccgccgtggtg
cacgagcgcttccgctccgtcctcgacgtggagcggcgactggcccttcgagccgggctc
ctgctccacgccctgctggccggcatcggcctcgcgggcatcgcgctcgcgatgaacggc
gacctctccgtcgcccggctggtcaccctcttcctggtcacctccaccttcgtcgggcag
atcgcgatgctggccaaccacctgcctgacctccaggccggcctgggtgcggtcatccgg
ctccggcagatgctcgctgtcgagccggagccccaagggggccggccggtgccggagcag
gcggcactcgagctggagatccgcgatctcgcctttgcctacgacgagggcaccttcgcg
ctgcgcgacatcaacctcttcctcccggccggggacacgctggccctggtcgggcgcacc
ggctcgggcaagtcgaccctggcgtccctggtctcccgggccgtcgagccgccccggggc
acgatcctgctcggcggtgtcgacatcctcgacatcgacctgcagcagctccgcgccagc
gtcggcgtggtcacccagcgcaccgagatcctggccggcaccctcgccgagaacatcact
ctcttcggggacgtcacccgggagcgggtgcagcaggccgtggccgagctcgggctcgac
ggatgggtcgccggccttccggacgggctcgacacactgctgggtcccggggggaccagg
ctgtcggcgggggaggagcagctggtcgcgttcgcccggctgctgatccgcaacgtgcgc
gtcgtcgtgctcgacgaggcgaccgcccgcatggacccgctgaccgagcaccgtgtcgtg
gcagccgccgaccggttgctccgcggtcgcaccggcgtgttgatcgcccaccggctcagc
accatcgagcgagctccgcacgtggccgtgctcgaccacggtcgcgtggtccaggagggc
ctgcgggccgtcctggcccgagagcccggggccttccgtgacctgctccacgccagccgt
gtcgagcagcggcagcagcggcgggccgacgacagcatcgacggcaccacccaggaccgg
ggtgacgacgagccggttgcgcacgccaccctcgacgacgcgatggtcggtgacccggcc
ggcggatcgtcggtggggggacgccggcgcgtcggtccgccgcccgatgtccccgacgtc
ggcaacgggccgtcgttggctcgcggcatcgcccacgcgctctcggtgcgtccgacctgg
ggcatctggggagccgccctcttcctgatgatctcggtgatcggcgcgcagggtgcgatc
accggtttggtgtggggccgcatcgtcgaggacctccaggtgggcaggtccccgggactg
ctcagcgtcgcgctcgtgctgtgcctgttggccatgccgttcatgctggccgacgcgttc
tggcgctacccgcgttggtggatcgaggtgatgctgcgggtccgcatgtccgtgctgcac
ggccagacgtcgcagcagcggctgacccggaccccgcccggcgaggtggtggcccgctcc
atggacgcagaccgctacgcccggtacgccgaccgttgggtcgacttcctcaacggcatg
atcatcgccgccttcaccgcgctgatcgccggcacgtggatcgccggtgccgtcctgctc
gcggtgatggtgacctcggcgctcgcctccgcggtgggtcgcccgatcgccggtcggtcg
gccgccgaggcgtccaccgcgcgtgccggcttcggccgggccctggtctcggcgctcgag
tcggcgcgcacggtcaagctggccgcggccaccccggccgtacgccgccacctgcgcgac
gtcgactccggccgggttgccgctgcggtcaaggagcaccgggtgcaggcgttcctcgac
ggcgtcccgatcgtgatggtgcagtgtggcgtggtgaccgcctgggcggtctacttcgca
ggcggttggagcctggccatcgccctgctggtcggcaacgccgtggccgggttcgactgg
ttcgggagggtggccggcatggtcgtcaccgaggcccccggcacccgcgcgtggcaggtc
gagaccgccaggttcgccggcggtgtcgacctgatggacctcccgccgggcgtcgacctg
gtcagcggcgccgcccccgacccggaacccgtgccgagagttccgctcgaccgactcgag
ctccgtgggttctccgccgtgcacgacgacggcacgatcggtgtctcgggcgtcgacctc
accgtcgaggcgggcgagctggtgctgctggtcggacaggtgggctcgggcaagtcgagc
ctgctggctgcgctcgccggcctgatcgactaccgcggtgacgtcctctggaaccacgac
gtggtccgggacccgcagcggttcctgcgccccggccaggtctcccacgtcgcccaagtg
ccgcgggtgctgtcgggaaccttcaacgacaacgtccggctcggccacgaccgcgccttc
gatgcaccggtgggggtggcccgactcgatgccgacgtcgaggaggcgggcggcagggac
gcgctcgtcgggcaccgcggcgtacgcctctccggaggccaggtgcagcgcctggcgctc
gcccgcgccctggccaccgacgccgagctgaccctcgccgatgacgtctccagcgcgctc
gacgccagcacggagatcgagctgtggcgttcgctgcgcgagcgcggcgccacggtgatc
ggggcgactgccaagcgggccgcgttgtcccgggcggatcgggtggtggttctcgtcgac
ggtgaggtggccgagatcgggccgtggacccagctcgccccgcgttggggacacctggcc
gggtga
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