KEGG   Nocardioides sp. JQ2195: ncot_04275
Entry
ncot_04275        CDS       T10874                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
noca  Nocardioides sp. JQ2195
Pathway
noca00010  Glycolysis / Gluconeogenesis
noca00020  Citrate cycle (TCA cycle)
noca00260  Glycine, serine and threonine metabolism
noca00280  Valine, leucine and isoleucine degradation
noca00310  Lysine degradation
noca00380  Tryptophan metabolism
noca00620  Pyruvate metabolism
noca00630  Glyoxylate and dicarboxylate metabolism
noca00640  Propanoate metabolism
noca00670  One carbon pool by folate
noca00785  Lipoic acid metabolism
noca01100  Metabolic pathways
noca01110  Biosynthesis of secondary metabolites
noca01120  Microbial metabolism in diverse environments
noca01200  Carbon metabolism
noca01210  2-Oxocarboxylic acid metabolism
noca01240  Biosynthesis of cofactors
Module
noca_M00009  Citrate cycle (TCA cycle, Krebs cycle)
noca_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
noca_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
noca_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:noca00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    ncot_04275 (lpdA)
   00020 Citrate cycle (TCA cycle)
    ncot_04275 (lpdA)
   00620 Pyruvate metabolism
    ncot_04275 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    ncot_04275 (lpdA)
   00640 Propanoate metabolism
    ncot_04275 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    ncot_04275 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    ncot_04275 (lpdA)
   00310 Lysine degradation
    ncot_04275 (lpdA)
   00380 Tryptophan metabolism
    ncot_04275 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    ncot_04275 (lpdA)
   00670 One carbon pool by folate
    ncot_04275 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:noca04147]
    ncot_04275 (lpdA)
Enzymes [BR:noca01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     ncot_04275 (lpdA)
Exosome [BR:noca04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   ncot_04275 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_oxidored HI0933_like GIDA FAD_binding_2 Lys_Orn_oxgnase NAD_binding_8 FAD_binding_3 AlaDh_PNT_C 2-Hacid_dh_C DAO 3HCDH_N
Other DBs
NCBI-ProteinID: QIX25903
UniProt: A0A6H1A065
LinkDB
Position
911984..913393
AA seq 469 aa
MTHFNVLVLGAGPGGYVAAIRAAQLGQSVAVVEEKYWGGVCLNVGCIPSKALLKNAELAH
TLTHEKAKFGIEGDATMSFGPTHKRSRQVSAGIVKGVHFLMKKNKITEVNGFGTLKGAVD
GKQTVEVKDAEGNATTYTCDNLIIAAGAKVRLVPGLELSQNVVTYEEQILDENLPKSIVI
GGSGAIGVEFAYVMKNFGVAVTIVEFLDRMVPTEDADVSKELLKHYKKLGINVMLSTKVE
KVEDTGSGVKVTVSPAGGGDAEVIEADKMLAAFGFAPRVEGYGLETAGVELTERGAIAVD
GRGRTNVSGIYAIGDVTGKMMLAHAAEAMGIVAAETIADAETIEIDFDMIPRATYCQPQI
GSFGYSEAQAKEKGYDVKTATFPFTANGKAQGLGEAVGFVKVVADAEHNEILGAHMIGPD
VTEQLPVLTLAQKWDLTADEVARNVFAHPTLSEAVKEAVHGIAGHMINF
NT seq 1410 nt   +upstreamnt  +downstreamnt
gtgacccacttcaatgttctcgtccttggtgccggtcctggtggctacgtcgcggcgatc
cgcgcagcccagctcggccagtccgtcgcggtcgtcgaggagaagtactggggcggtgtc
tgcctcaacgtcggctgcatcccgtccaaggcgctcctcaagaacgccgagctcgcccac
acgctcacgcacgagaaggcgaagttcggcatcgagggcgacgccacgatgtccttcggt
ccgacgcacaagcgctcgcgccaggtgtcggccggcatcgtcaagggcgtccacttcctg
atgaagaagaacaagatcaccgaggtcaacggcttcggcacgctcaagggcgccgtcgac
ggcaagcagactgtcgaggtgaaggacgccgagggcaacgccacgacctacacctgcgac
aacctgatcatcgccgcgggcgccaaggtgcgcctggtgccgggcctcgagctcagccag
aacgtggtgacctacgaggagcagatcctcgacgagaacctgccgaagtcgatcgtgatc
ggtggttcgggtgccatcggcgtcgagttcgcctacgtgatgaagaacttcggcgtcgcc
gtgacgatcgtggagttcctcgaccggatggtgcccaccgaggacgccgacgtgtccaag
gagctgctgaagcactacaagaagctgggcatcaacgtgatgctctccaccaaggtggag
aaggtcgaggacaccgggtccggtgtcaaggtgacggtcagcccggctggtggcggcgat
gcggaggtcatcgaggccgacaagatgctggccgccttcggctttgccccgcgcgtcgag
ggctatggcctcgagaccgccggtgtcgagctgaccgagcgcggcgccatcgccgtcgac
gggcgcggacgcaccaacgtctccggcatctatgcgatcggtgacgtcaccggcaagatg
atgctggcccacgccgccgaggcgatgggcatcgtcgcggcggagaccatcgccgacgcc
gagaccatcgagatcgacttcgacatgatcccgcgggcgacctactgccagccgcagatc
ggttccttcggctactccgaggcccaggccaaggagaaggggtacgacgtcaagaccgct
acgttcccgttcaccgccaacggcaaggcccagggcctcggcgaggcagtgggcttcgtc
aaggtcgtcgccgacgccgagcacaacgagatcctcggtgcccacatgatcggacccgac
gtcaccgagcagctcccggtgctcaccctcgcccagaagtgggacctgaccgccgacgag
gtggcgcgcaacgtgttcgcccacccgacgctgtccgaggccgtcaaggaagccgtgcac
ggcatcgccggccacatgatcaacttctga

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