KEGG   Nocardioides sp. JQ2195: ncot_05940
Entry
ncot_05940        CDS       T10874                                 
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
noca  Nocardioides sp. JQ2195
Pathway
noca03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:noca00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    ncot_05940
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:noca03019]
    ncot_05940
   03009 Ribosome biogenesis [BR:noca03009]
    ncot_05940
   03036 Chromosome and associated proteins [BR:noca03036]
    ncot_05940
Enzymes [BR:noca01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     ncot_05940
Messenger RNA biogenesis [BR:noca03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     ncot_05940
Ribosome biogenesis [BR:noca03009]
 Eukaryotic type
  90S particles
   RNase
    ncot_05940
 Prokaryotic type
  rRNA processing factors
   ncot_05940
Chromosome and associated proteins [BR:noca03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     ncot_05940
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm DSRM_2 RM44_endonuclase DND1_DSRM
Other DBs
NCBI-ProteinID: QIX26193
LinkDB
Position
1237611..1238384
AA seq 257 aa
MTEVSEHSDPTDPSTEPELDYEELRSALGDPVLDTELLDLALTHRSFAYENGGLPTNERL
EFLGDSVLGVVVTETLYRTHPDLSEGRLAKLRAAVVNARALAEVARTVGLGEHIKLGRGE
QSTGGREKASILSDTVEAVIGAIYISGGFENAVAVVHLLFDPLLEAAAGLGAGLDWKTSL
QELSADRALGVPEYVIEDSGPDHLKTFTAQVRVGEQLYGHGVGRSKKEAEQQAAETAYGE
ISATPVVEESAPDSDAS
NT seq 774 nt   +upstreamnt  +downstreamnt
ttgaccgaggtttccgagcactccgatccgactgacccgtccacggagccggaactcgac
tatgaggagctgaggtcggcactcggtgatccagtcctggacaccgagctgctcgacctt
gccctcacccaccgttccttcgcgtacgagaacggtggtctgccgaccaacgagcgcctg
gagttcctgggtgactcggtgctcggtgtggtcgtcaccgagacgctgtaccgcacccac
cccgacctgtccgagggcaggctggccaagttgcgggctgcggtggtcaacgcgcgtgcc
ttggcagaggtggcgcgcaccgtcggtctcggcgagcacatcaagctgggccgcggtgag
cagtcgaccggtggccgcgagaaggcctcgatcctctccgacaccgtcgaggcggtgatc
ggtgcgatctacatctccggtgggttcgagaacgcggtcgccgtcgtgcacctcctgttc
gacccgctgctcgaagcagccgccggcctgggtgccggcctggactggaagacctccctg
caggagctgtcggccgatcgtgcgctgggcgttcccgaatacgtcatcgaggactccggc
cccgaccacctgaagaccttcaccgcccaggtccgcgtcggtgagcagctgtacggccac
ggcgtcggccgctccaagaaggaggccgagcagcaggccgccgagacggcgtacggcgag
atctcggcgacgccggtcgtcgaggagtcggctcccgactccgacgcctcctga

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