Nocardioides sp. JQ2195: ncot_05940
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Entry
ncot_05940 CDS
T10874
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
noca Nocardioides sp. JQ2195
Pathway
noca03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
noca00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
ncot_05940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
noca03019
]
ncot_05940
03009 Ribosome biogenesis [BR:
noca03009
]
ncot_05940
03036 Chromosome and associated proteins [BR:
noca03036
]
ncot_05940
Enzymes [BR:
noca01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
ncot_05940
Messenger RNA biogenesis [BR:
noca03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ncot_05940
Ribosome biogenesis [BR:
noca03009
]
Eukaryotic type
90S particles
RNase
ncot_05940
Prokaryotic type
rRNA processing factors
ncot_05940
Chromosome and associated proteins [BR:
noca03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
ncot_05940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DSRM_2
RM44_endonuclase
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
QIX26193
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All DBs
Position
1237611..1238384
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AA seq
257 aa
AA seq
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MTEVSEHSDPTDPSTEPELDYEELRSALGDPVLDTELLDLALTHRSFAYENGGLPTNERL
EFLGDSVLGVVVTETLYRTHPDLSEGRLAKLRAAVVNARALAEVARTVGLGEHIKLGRGE
QSTGGREKASILSDTVEAVIGAIYISGGFENAVAVVHLLFDPLLEAAAGLGAGLDWKTSL
QELSADRALGVPEYVIEDSGPDHLKTFTAQVRVGEQLYGHGVGRSKKEAEQQAAETAYGE
ISATPVVEESAPDSDAS
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
ttgaccgaggtttccgagcactccgatccgactgacccgtccacggagccggaactcgac
tatgaggagctgaggtcggcactcggtgatccagtcctggacaccgagctgctcgacctt
gccctcacccaccgttccttcgcgtacgagaacggtggtctgccgaccaacgagcgcctg
gagttcctgggtgactcggtgctcggtgtggtcgtcaccgagacgctgtaccgcacccac
cccgacctgtccgagggcaggctggccaagttgcgggctgcggtggtcaacgcgcgtgcc
ttggcagaggtggcgcgcaccgtcggtctcggcgagcacatcaagctgggccgcggtgag
cagtcgaccggtggccgcgagaaggcctcgatcctctccgacaccgtcgaggcggtgatc
ggtgcgatctacatctccggtgggttcgagaacgcggtcgccgtcgtgcacctcctgttc
gacccgctgctcgaagcagccgccggcctgggtgccggcctggactggaagacctccctg
caggagctgtcggccgatcgtgcgctgggcgttcccgaatacgtcatcgaggactccggc
cccgaccacctgaagaccttcaccgcccaggtccgcgtcggtgagcagctgtacggccac
ggcgtcggccgctccaagaaggaggccgagcagcaggccgccgagacggcgtacggcgag
atctcggcgacgccggtcgtcgaggagtcggctcccgactccgacgcctcctga
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