Nocardioides sp. JQ2195: ncot_06760
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Entry
ncot_06760 CDS
T10874
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
noca Nocardioides sp. JQ2195
Pathway
noca03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
noca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ncot_06760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
noca03400
]
ncot_06760
Enzymes [BR:
noca01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
ncot_06760
DNA repair and recombination proteins [BR:
noca03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
ncot_06760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
QIX28643
LinkDB
All DBs
Position
complement(1406386..1407264)
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AA seq
292 aa
AA seq
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MALRNPIGSHVPVGKGLASGALAKAREIGYETLQVFVGNPRGWAASKGNPAEDRAFREAR
EDGTRAFIHAPYLVNLGSPTPATYEKSVETVAHNLRRAAEIGAEGVVVHTGSFVDPTGSE
EKYAAAMRQVREGLLPLLEAVEDDAAPWLLLEPTAGQGRSLCAGVEDLHPYLSALDFHPK
AGICLDTCHVFAAGAPLDETGGTKATVDRIVEIGGPGRLRLIHANDSMDVRGAFKDRHQN
IGAGHIGQDAFRDLFAHPATDGVPFVLETPGSREVGSPDLDLLKKLREQARE
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atggccctgcgcaaccccatcggttcccacgtcccggtcggcaagggattggcctccggc
gccctcgccaaggctcgcgagatcggctacgagacgctccaggtcttcgtcggcaatccg
cgcggttgggccgcgagcaagggcaaccccgcggaggacagggcgttccgcgaggcccgc
gaggacggcactcgcgcgttcatccacgcgccgtacctggtgaacctcggttcccccacg
ccggcgacctacgagaagtccgtggagaccgtcgcccacaacctcaggcgggccgccgag
atcggcgccgagggtgtcgtggtgcacaccggctcgttcgtcgaccccaccggatccgag
gagaagtacgccgccgcgatgcgccaggtgcgcgagggcctcctccccctcctcgaggca
gtcgaggacgacgccgccccgtggctgctgctggagccgaccgccgggcagggtcgatcc
ctctgcgccggggtggaggacctgcatccctacctctcggcgctcgacttccaccccaag
gcgggcatctgcctggacacctgccacgtcttcgcggccggtgcccctctcgacgagacg
ggtggcacgaaggcgaccgtcgaccggatcgtcgagatcggcggccccggccgcctgcgc
ctgatccacgccaacgactccatggacgtgcgtggcgcgttcaaggaccggcaccagaac
atcggcgccggccacatcggtcaggacgccttccgcgacctgttcgcccaccccgccacc
gacggggtgccgttcgtcctcgagacaccgggctcgcgcgaggtcgggagtcccgacctc
gacctgctcaagaagttgcgcgagcaggcccgcgagtga
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