Nocardioides sp. JQ2195: ncot_09845
Help
Entry
ncot_09845 CDS
T10874
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
noca Nocardioides sp. JQ2195
Pathway
noca03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
noca00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ncot_09845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
noca03021
]
ncot_09845
03400 DNA repair and recombination proteins [BR:
noca03400
]
ncot_09845
Enzymes [BR:
noca01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ncot_09845
Transcription machinery [BR:
noca03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ncot_09845
DNA repair and recombination proteins [BR:
noca03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ncot_09845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
SopE_GEF
Motif
Other DBs
NCBI-ProteinID:
QIX26871
UniProt:
A0A6H1A434
LinkDB
All DBs
Position
complement(2058106..2058432)
Genome browser
AA seq
108 aa
AA seq
DB search
MSVPTGEGVTNPSIDELLTKTDSKYKLVLYSAKRARQINAYYSQLGEGLLEYVGPLVDTH
VQEKPLSIALREINEDLLTCEDVDPAELAAEEAAAKAAAAEAESSVSE
NT seq
327 nt
NT seq
+upstream
nt +downstream
nt
gtgtctgtccccaccggcgagggtgtcaccaatccctcgatcgacgaactgctcaccaag
acggactcgaagtacaagctggtcctctacagcgccaagcgggcccgtcagatcaacgcc
tactactcgcagctgggcgagggcctgctcgagtacgtcggtcccctggtcgacacccac
gtccaggagaagccgctgtccatcgccttgcgcgagatcaacgaggacctgctgacctgc
gaagacgtcgacccggccgagcttgccgccgaggaggccgctgccaaggctgccgcggcc
gaggccgagtcgagcgtctccgaataa
DBGET
integrated database retrieval system
