Nocardioides sp. JQ2195: ncot_10790
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Entry
ncot_10790 CDS
T10874
Symbol
cydD
Name
(GenBank) thiol reductant ABC exporter subunit CydD
KO
K16014
ATP-binding cassette, subfamily C, bacterial CydCD
Organism
noca Nocardioides sp. JQ2195
Pathway
noca02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
noca00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
ncot_10790 (cydD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
noca02000
]
ncot_10790 (cydD)
Transporters [BR:
noca02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
ncot_10790 (cydD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_21
AAA_22
AAA_29
AAA_16
RsgA_GTPase
AAA_33
AAA_25
AAA_18
nSTAND1
PRK
NACHT
Rad17
NTPase_1
AAA_24
APS_kinase
MMR_HSR1
Mg_chelatase
DUF87
Cytidylate_kin
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
QIX27025
LinkDB
All DBs
Position
2275445..2278945
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AA seq
1166 aa
AA seq
DB search
MKPLDPQVLPHLAPARRPLAVVVGGNVLTGLLVVAQAFAGAALVAGVLDAPSGTGWHAAA
WWFAGITVLRAVLGRVVDAAAARAAGQVGVHLRDLVLRSALAQSSTDLGRRRRGELTTLA
TRGVAAVEPYLTRYLPALVLAVVLPVITLVAIAAQDWLSALIVLLTLPLLPVFAVLIGMT
TRDKADRQWRALGTLAGHFLDVVRGLPTLVAHRRAEAQTAQIRAVTDRHRRATVDTLKLA
FASSAALELIATISVALVAVCVGLRLAGGSLDLRTALTVLLLAPEAYWPIRRVGAEFHAA
AEGTATFTAITHLTRTGSSCVANGQFLSSEQAVVDASPRTIRLDDVSLAWPDREPVVSGL
SARLLPGTITAVVGPSGCGKSTLLHTLLGELPVAGGMLRAGGDDLAAVRRTSWQARVAHL
PQRPWLVADTIAANLRLGRPEATEAELYAALATVDLAGLVFALPDGLATRLGDEGLGLSA
GQRARLALARVVLAERPYVLLDEPTAHLDADTERIMLDVIRMVAETSTVVVVAHRQAVVD
VADHVIDLATVAVDAPRPHELTGAGGGPGALPGDEPGNEPGDGTGAESGAVPARGDALAR
RPAPARRTQRSAPVDAAGPGVGKRRLDGAWGWALTAVLATLGAASGVALTATAGWLIARS
AEQPPILMLTVAIVGVRTFGLARPALHYVERLLGHDLALRELAERRAGVFARLVPLVPGR
TGRHGDVLTGVVDDVDSHLDDLLRVRLPIASWLGVTAIAGTLAWFLLPLAVLPVVGVALL
GGGATLLIARAGARRHETAFVDARAEVGRRSADLIGSARQWVVWGAAERALSEADVAGKR
LARSAQGSVAGVAVGRAVALLSAGLGTVAVAFIGAPGLAEGAISGPMLALLLLLPLALAE
VTAPLADAGALLVRTSAAQARLTSLTGLDPAVSEPTAPASLDGSPAISVRNASLGWRPDE
EVLQGLDLDLPPGRRIGITGPSGSGKSTLALALLKLLPVRAGHHDLGSIPVADLDGDDVR
RVVGLLDDDPYLFGSTLVENVRLARPSATDGEVADALRAAHLGDWVDGLADGIHTRVGDG
GVEVSGGERARIGLARAVLAGRDVLVLDEPTAHLDAATARAVADDLLSASAGRSIVWITH
DTVGLAEMDEILDLGAGAELVVPATG
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atgaagcccctggacccgcaggtcctcccccacctggctccggcacggcgcccgctggcc
gtcgtcgtgggcggcaacgtgctgaccgggctgctggtcgtcgcccaggcgttcgccggg
gcggcgctggtcgccggcgtgctcgacgcgccgtcgggcaccggctggcacgcggcggca
tggtggttcgcggggatcacggtcctccgggccgtgctcggtcgtgtcgtcgacgccgct
gcggcccgtgcggcggggcaggtcggcgtacacctgcgtgacctggtgctccgctcggcc
ctggcgcagtcgtcgaccgacctcggtcgtcgccgtcgtggtgagctgaccacactggcc
acccgcggggtggcggccgtcgagccgtatctcacccgctacctgccggcgctcgtgctc
gcggtcgtcctgcccgtgatcacgctggtcgcgatcgcggcgcaggactggctcagcgcg
ctgatcgtgctgctcaccctgccgctgctcccggtcttcgcggtgctgatcgggatgacc
acgcgcgacaaggcagaccggcagtggcgcgcgctgggcaccctcgccgggcacttcctc
gacgtggtccgcggcctgcccaccctcgtggcccaccgccgcgccgaagcacagaccgcc
cagatccgcgcggtcaccgaccgccaccgccgggccaccgtggacaccctcaagctggcg
ttcgcctcctcggccgccctggagctgatcgccaccatctcggtggccctggtcgcggtc
tgcgtcggcctgcgcctggccggcggttccctggacctgcgcaccgcgttgacggtgctg
ctcctggctcccgaggcctactggccgatccgccgcgtcggcgccgagttccacgccgca
gccgagggcaccgccaccttcaccgcgatcacccacctcacgcgaacgggcagttcttgc
gtcgcgaacgggcaattcttgtcgtccgaacaggcagttgttgatgcctcaccgcgcacc
atccgcctcgacgacgtctcactggcctggcctgatcgcgaaccggtggtgagcggtctc
agcgcacggctgctgccgggcacgatcaccgccgtggtcggcccgtccggctgcgggaag
agcacgctgctgcacacgctcctgggcgagctgcccgtcgccggcggcatgctccgtgcc
ggcggcgacgacctcgcggccgtccggcgtacgtcgtggcaggcgcgcgttgcacacctc
ccgcaacgcccgtggttggtcgcggacaccatcgccgcgaacctgcgcctgggccgcccc
gaggccaccgaggcggagctgtacgccgccctggccaccgtcgacctggccggactcgtc
ttcgcgctccccgacggcctggccacccggctcggcgacgagggcctggggttgtccgcc
gggcagcgcgcccggctggcgttggcccgggtggtgctcgccgagcgtccctacgtgctg
ctcgacgaaccgaccgcacacctcgacgccgacacagagcggatcatgctcgacgtgatc
aggatggtggccgagaccagcacggtcgtcgtcgtggcacaccgccaggcggtcgtcgac
gtcgccgaccacgtgatcgacctggccaccgtcgccgtcgacgccccgcgcccgcacgag
ctcaccggtgcgggaggcggaccgggagccctccccggagacgaaccgggaaacgaaccg
ggagacggaaccggagccgagtcgggagccgtgccggcacgaggcgacgccctcgcgcgt
cgacccgcacctgcgcgacgtacccagcggtcagcgccggtggacgcggccggcccggga
gtcggcaagcgtcgcctcgacggcgcgtggggctgggccctgacggccgtgctggccacg
ctcggcgctgcctccggcgtcgccctgaccgccaccgctggctggctcatcgcgcgcagt
gccgagcagccgccgatcctgatgctcaccgttgccatcgtgggcgtgcggaccttcggc
ctggctcgacctgcactgcactacgtggagcgcctgctcggccacgacctcgccctgcgc
gagctggccgagcgccgtgcaggcgtcttcgcccgtctggtgcccctggtcccgggccgc
accggccgtcacggcgacgtgctcaccggagtcgtcgacgacgtcgactcccacctcgac
gacctgctgcgggtccgtctgccgatcgccagctggctcggggtcaccgccatcgccggc
accctcgcgtggttcctgctacccctggccgtgctgccggtcgtcggggtcgcgctgctc
ggaggtggcgccaccctcctcatcgcgagggcgggcgcgcgcaggcacgagaccgcgttc
gtggacgcacgtgccgaggtcggacgccgcagcgcggacctgatcggctccgcccgccag
tgggtcgtctggggtgccgccgagcgggccctgtccgaggccgatgtcgccgggaaacgc
ctggcccggagcgcccagggctccgtcgcgggggtcgccgtcggccgcgcggtcgcgctc
ctgagcgcaggcctgggcaccgtggcggtcgcgttcatcggcgcaccgggactggccgag
ggcgccatcagcgggccgatgctggccctgctcctcctgctcccgctggccctggccgag
gtcaccgcacccctggccgacgccggcgccctcctcgtgcgcacgtcggccgcccaggca
cggctcacctccctgaccgggctggacccggccgtctccgagccgaccgccccggcctcg
ttggacggctctccggcaatctccgtgcgcaacgcctctctgggttggaggcccgacgag
gaggtgctccaaggactcgacctcgacctgcctcccggacgccggatcggcatcaccggg
ccgtcgggctcgggcaagtcgacgctggcactggccctcctcaagctgctgcccgtccgg
gcgggccaccacgacctgggctccatcccggtcgccgacctcgacggggacgacgtacgc
cgtgtggtcgggctgctcgacgacgacccctacctcttcggctcgacgctcgtcgagaac
gtccggttggcccgaccgagcgccacggacggcgaggtggcagacgcactgcgcgccgcc
cacctcggtgactgggtcgacggcctggccgacgggatccacactcgagtcggcgacggc
ggagtcgaggtctccggcggcgagagggcccgcatcggcctggcccgagccgtgctcgcc
ggacgcgacgtcctcgtgctcgacgaacccaccgcccatctcgacgcggccacggcacgc
gcagtcgccgacgacctgctcagtgccagcgcgggacgcagcatcgtgtggatcacgcac
gacacggtcggcctggccgagatggacgagatcctcgacctcggagcgggtgccgagctg
gtggtcccggcaaccgggtga
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