Nocardioides sp. JQ2195: ncot_12690
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Entry
ncot_12690 CDS
T10874
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
noca Nocardioides sp. JQ2195
Pathway
noca00061
Fatty acid biosynthesis
noca00071
Fatty acid degradation
noca01100
Metabolic pathways
noca01212
Fatty acid metabolism
noca02024
Quorum sensing
noca04146
Peroxisome
Module
noca_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
noca00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
ncot_12690
00071 Fatty acid degradation
ncot_12690
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
ncot_12690
09145 Cellular community - prokaryotes
02024 Quorum sensing
ncot_12690
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
noca01004
]
ncot_12690
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
noca04147
]
ncot_12690
Enzymes [BR:
noca01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
ncot_12690
Lipid biosynthesis proteins [BR:
noca01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
ncot_12690
Exosome [BR:
noca04147
]
Exosomal proteins
Exosomal proteins of breast milk
ncot_12690
Exosomal proteins of breast cancer cells
ncot_12690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
QIX27363
LinkDB
All DBs
Position
complement(2690034..2691854)
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AA seq
606 aa
AA seq
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MPINHDASFLESMPKNVAVQFLGRVTKSSDKEAYRFPVGDTWESVTWQQVGDRVNNLAAG
LMALGIEPEQRVGIASSTRYEWILADLAIMLSGAATTTVYSSTNADDTAYILSDSGSRIV
FAEDDDQIAKLVAHKSDLPHISKVVTFDGQADGDWVIGIDDLAALGETYLEGNPNAVVEH
AEAIEPEQLATLIYTSGTTGPPKGVRLRHRSWVYEGEAIASQNILDESDLQFLWLPMAHA
FGKVLLSTQLACGFATAVDGRVDKIIDNLAVVKPTFMGAAPRIFEKAYSRIVTMQAAEGG
AKEKLFKKAFAVGLEVDRLKREGKSVPFGLKLQHGLFDKLVFAKVRARFGGRVRFFISGA
AALNREVAEWFHAAGITVLEGYGMTENAAGATVNHPDQYKFGSVGAPFPGSEVKIAEDGE
VLLRGPHVMEGYHNLPEVTAETLTEDGWLHTGDIGELDDDGFLKITDRKKDLFKTSGGKY
IAPSAIESQFKAICPYASQFLAIGNERNFVSALITLDPDQMTDWAAQNGKEGASYADVVA
SPEVREMVQGYVDELNQRLNRWETVKKFAILDHDLSVESGELTPSMKVKRKVVEGNQQDV
ISSFYG
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgccgatcaatcacgacgcgtccttcctcgagagcatgcccaagaacgtcgctgttcag
ttcctcggtcgggtcacgaagtcgtcggacaaggaggcctaccgtttcccggtcggagac
acctgggagtccgtgacctggcagcaggtaggggaccgggtcaacaacctggccgcggga
ctcatggcactcgggatcgagcccgagcagcgcgtcggcatcgcctcgtccacccgctac
gagtggatcctggccgacctcgcgatcatgctctccggagccgccacgaccacggtctac
tcgtcgacgaacgccgatgacacggcgtacatcctcagtgactccgggagccggatcgtc
ttcgccgaggacgacgaccagatcgccaagctggtcgcgcacaagtccgacctgccgcac
atctccaaggtggtcaccttcgacggccaggctgacggtgactgggtgatcggcatcgac
gacctcgccgcgctgggcgagacctacctcgagggcaacccgaacgcggtcgtcgagcac
gccgaggcgatcgagcccgaacagctcgcgacgctgatctacacctccgggacgaccggt
cctcccaagggtgtgcgcctgcggcaccggtcctgggtctacgagggcgaggcgatcgcg
tcgcagaacatcctcgacgagagcgacctccagttcctgtggctgccgatggcacacgcg
ttcggcaaggtgctgctctcgacccagctggcctgtggcttcgcgacggccgtcgacggc
cgcgtcgacaagatcatcgacaacctggcggtggtcaagcccaccttcatgggtgctgcc
ccgcggatcttcgagaaggcctactcccgcatcgtcacgatgcaggccgccgagggcggt
gccaaggagaagctcttcaagaaggcgttcgcggtcggcctcgaggtcgaccggctgaag
cgtgagggcaagtcggtcccgttcggcctcaagctgcagcacggcctcttcgacaagctg
gtcttcgccaaggtccgtgcccgcttcggtggacgggtccgcttcttcatctccggcgcc
gcggccctgaaccgcgaggtcgctgagtggttccacgcagcgggcatcaccgtgctcgag
ggctacggcatgaccgagaacgctgctggtgcgacggtcaaccaccccgaccagtacaag
ttcggttccgtgggcgcaccgttcccgggtagtgaggtcaagatcgccgaggacggcgag
gtcctgctccgtggcccgcacgtcatggagggctaccacaacctcccggaggtcaccgcc
gagacgctcacggaggacggttggctgcacacgggtgacatcggtgagctcgacgacgac
ggcttcctgaagatcacggaccgcaagaaggacctgttcaagacctcagggggcaagtac
atcgcgccctcggcgatcgagtcgcagttcaaggcgatctgtccctacgccagccagttc
ctggcgatcggcaacgagcgcaacttcgtctcggcgttgatcaccctggatcccgaccag
atgaccgactgggcggcgcagaacggcaaggagggggcgtcgtacgccgacgtcgtcgcc
tcgcccgaggtgcgcgagatggtgcagggctacgtcgacgagctcaaccagcgcctcaac
cgctgggagacggtcaagaagttcgcgatcctcgaccacgacctcagcgtcgagtccggg
gagttgactccgtcgatgaaggtcaagcgcaaggtcgtcgaggggaaccagcaggacgtc
atctcgtccttctacggctga
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