Nocardioides sp. JQ2195: ncot_13160
Help
Entry
ncot_13160 CDS
T10874
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
noca Nocardioides sp. JQ2195
Pathway
noca00300
Lysine biosynthesis
noca00470
D-Amino acid metabolism
noca01100
Metabolic pathways
noca01110
Biosynthesis of secondary metabolites
noca01120
Microbial metabolism in diverse environments
noca01230
Biosynthesis of amino acids
Module
noca_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
noca00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
ncot_13160 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
ncot_13160 (lysA)
Enzymes [BR:
noca01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
ncot_13160 (lysA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
QIX27450
UniProt:
A0A6H1A5X1
LinkDB
All DBs
Position
complement(2786285..2787721)
Genome browser
AA seq
478 aa
AA seq
DB search
MPTAHPSGWAHADGALRGPQWLREPDDSNTLVQQLWSSTAHKNDDGALVVGGVDLRDLVA
EHGSPAYVLDEDDFRGRARAFRDAFAAYDVYYAGKAFLCTTVARWIAEEGLCLDVCSNSE
LTVALRGGVDPARIGYHGNNKSTADLRRAVEVGVGRIVVDSFHEIDRLVEIGARAKVMIR
VTAGVEAHTHEYIATAHEDQKFGFSITAGDAFEAVRRVLAAPGLELLGLHSHIGSQIFDS
SGFEVAARRVLALHARVSDELSVTMPEMDLGGGFGIAYTTQDDPSDPAQLATEMSKIVEH
ECRALGVDEPRLSIEPGRAIVGPSMCSIYEVGTVKEVALDGPKDANPRRTYVSVDGGMSD
NIRTALYDADYSCTLASRRSDAAPVLARVVGKHCEAGDIIVKDEFLPGDVAPGDLVAVPG
TGAYCRSMASNYNHALRPPVIAVRDGVARVVVRRETEDDLLATDVAAQDARHTDGASS
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
gtgcccaccgcccacccgtccggctgggcgcacgccgatggtgccctgcgtgggccccag
tggttgcgcgagcctgacgactccaacaccctggtccagcagctctggtcctcgaccgcc
cacaagaacgacgacggcgcgctggtcgtggggggagtggacctgcgtgacctggtcgcc
gagcacggctctccggcgtacgtcctcgacgaggacgacttccgtggccgcgcccgcgcc
ttccgcgatgccttcgcggcctacgacgtctactacgcgggcaaggcgttcctgtgcacg
accgtcgcccggtggatcgccgaggagggcctctgtctcgacgtctgctccaacagcgag
ctcaccgtcgcgctgaggggcggcgtggacccggcccgcatcggctaccacggcaacaac
aagtcgacggcagacctgcgccgcgccgtggaggtcggggtcggccgcatcgtcgtcgac
tccttccacgagatcgaccggctggtcgagatcggtgcgcgcgcgaaggtgatgatccgg
gtcaccgccggcgtcgaggcgcacacccacgaatacatcgccaccgcccacgaggaccag
aagttcggcttctccatcacggcaggcgacgccttcgaggcggtacgccgggtgctcgcg
gcgcctggcctcgagctgctcggactgcacagccacatcggcagccagatcttcgactcc
tccgggttcgaggtggccgcgcgacgggtgctggccctgcacgcccgggtctcggacgag
ctgtcggtcaccatgcccgagatggacctcggcgggggcttcggcattgcctacacgacg
caggacgacccgtccgaccccgcacagctggccaccgagatgagcaagatcgtcgagcac
gagtgccgggcgctcggcgtcgacgagccgcggctctcgatcgagcccggccgggcgatc
gtcggacccagcatgtgctccatctatgaggtgggcacagtcaaggaggtcgcactcgac
ggccccaaggacgccaacccccggcgcacctacgtgtcggtcgatgggggcatgagcgac
aacatccgcactgccctctatgacgctgactactcctgcaccctggcctcacgacgctcc
gacgcggcgccggtgctggcgcgggtggtcggcaagcactgcgaggccggtgacatcatc
gtcaaggacgagttcctgcccggcgacgtggcccccggcgacctcgtggccgtccccggg
acgggtgcctactgccgctcgatggcgtccaactacaaccacgccctgcgcccaccggtg
atcgctgtgcgggacggtgtcgcgcgcgtcgtcgtacgacgagagactgaggacgacctg
ctggccacggacgtggccgctcaggacgcacggcacacggatggagcaagcagttga
DBGET
integrated database retrieval system