Nocardioides sp. JQ2195: ncot_13870
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Entry
ncot_13870 CDS
T10874
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
noca Nocardioides sp. JQ2195
Brite
KEGG Orthology (KO) [BR:
noca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
noca03021
]
ncot_13870
Transcription machinery [BR:
noca03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ncot_13870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_37
Sigma70_ECF
MarR_2
HTH_IclR
HTH_Crp_2
HTH_23
KORA
HTH_Tnp_4
DUF7343
HTH_24
HTH_3
MarR
DUF134
UPF0122
HTH_28
Crp
HTH_54
Motif
Other DBs
NCBI-ProteinID:
QIX27568
LinkDB
All DBs
Position
complement(2920662..2921471)
Genome browser
AA seq
269 aa
AA seq
DB search
MTPGSFPSRELPREQRRRLTACLLRQAAQAEDDELRAHLLEEVVLANICVARSIASRYRS
RGVASEDLEQVANAALVRAVNQFDGDRASDFLSFAVPSIRGELRRYFRDHGWVVRPPRRV
QELQSEVIEERDRHQAGERRTPTDAQIAERLGVPEADVTEALRAEGCFTPSSLDAQLSEQ
GGATVGESLADSHSGEDSDAAEARVMLQPVVRQLSSRDRELLRLRFFEELTQQEIANEFG
VTQTQVSRLLSRVLRDLRCSLEEGQGTPI
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgacacccggttcctttccgtccagagaacttccccgtgagcaacgccggcgcctgacc
gcctgtctgctgcgacaagcagcacaggcagaggacgacgagctgcgcgcccatctgctc
gaggaggtcgtgctggccaacatctgcgtcgcccgcagcattgcctcgcgctatcgctcc
cgcggggtcgcgtcagaagatctcgagcaagtggcgaacgccgcgctcgtgcgagccgtc
aaccagttcgacggcgaccgtgccagcgacttcctgtccttcgcggtgcccagcatccgc
ggcgagctccgccgctacttccgtgaccacggttgggtggttcgaccgccgcgccgggtc
caggagctgcagtccgaggtcatcgaggaacgcgatcgacaccaagccggcgagcggcga
accccgaccgatgcccagatcgcggagcggctgggagtgccggaggcggacgtcaccgag
gcgctgcgcgccgagggatgcttcaccccctcctcgctcgacgcacagctgtcggagcag
gggggcgccaccgtcggtgagtccctcgccgactcgcactccggcgaggacagcgacgca
gcggaggctcgtgtcatgctccagcccgtcgtgcgccagttgtcctcgcgcgatcgtgag
ctcctgcgtctcaggttcttcgaggagctgacccagcaggagatcgcgaacgagttcggc
gtgacgcagacccaggtctcccgtttgctcagccgggtgctgcgcgatcttcgctgctcc
ctcgaggagggtcagggaacgcccatctga
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