Nocardioides sp. JQ2195: ncot_14165
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Entry
ncot_14165 CDS
T10874
Name
(GenBank) ATP-dependent DNA helicase UvrD2
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
noca Nocardioides sp. JQ2195
Pathway
noca03420
Nucleotide excision repair
noca03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
noca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ncot_14165
03430 Mismatch repair
ncot_14165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
noca03400
]
ncot_14165
Enzymes [BR:
noca01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ncot_14165
DNA repair and recombination proteins [BR:
noca03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ncot_14165
MMR (mismatch excision repair)
Other MMR factors
ncot_14165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
HRDC
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
HHH_5
DZR
C1_1
Motif
Other DBs
NCBI-ProteinID:
QIX27616
UniProt:
A0A6H1A3N9
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All DBs
Position
complement(2967385..2969418)
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AA seq
677 aa
AA seq
DB search
MPTPADLLAALDPEQRQVAEALRGPVRVLAGAGTGKTRAITHRIAHGVASGVYQPGEVLA
VTFTTRAAGEMRTRLRELGAPGVQARTFHAAALRQLRYFWPSVHGSELPTLTESKLALMA
LAARRQRLAVDQGTLRDLASEVEWAKVSNVRPEEYPRLAPARGREVNNVDAETVARVFGT
YEDVKRGQGRMDMEDVLLLTAALLAEDERVAAQVRRQYKFFVVDEFQDVSPLQSALLDLW
LGGRDEICVVGDPAQTIYSFAGANASYLREFSAKHSGTTSIELVRNYRSTPEVIGAANAL
LSGTSSRGVQLTAQRASGPAITYVEHTDEVDEAESVAAEVLRLQDEGVSPGSMAVLFRIN
AQSEAFEDALAARNIPYVVRGAARFFDRPEVRQAITLLRGTARSGAGGDDLVDDVRDTLA
GMGWTSEPPSGRGTARDRWESLHALVSQAETYAASDGSSLGGFVDDLDRRAQEQHAPVAE
GVTLATLHTAKGLEWDAVFVCGAQEGSLPISFAQTPAEVEEERRLLYVGITRARVHLRIS
WSLARKPGGRKTRSASRFLAALRPDVHEPRPARTKKAARAAMCGTCGRPLSTAGERKVGR
CIDCPATYDEDLFARLKEWRRERAGEDGVPAYVVFTDKTLEAVAEMKPADDAQLLRISGI
GAAKVERYGDELLALIN
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgccgacccccgctgacctgttggccgctctcgaccccgagcagcggcaggtggccgag
gccctgcgtggtccggtgcgggtgctcgccggggcggggaccggcaagaccagggcgatc
acgcaccgcatcgcgcacggcgtcgccagcggtgtctaccagcccggcgaggtgctggcg
gtcacgttcaccacccgggctgcgggggagatgcgcacccggctgcgagagctcggtgcc
ccgggcgtccaggctcgcaccttccacgccgccgcgctgcgccagctgcggtacttctgg
ccctcggtccacggcagcgagctacccacactgaccgagtcgaagctcgcactgatggcg
ctggcggcccgccgccaacgcctcgccgtcgaccagggaaccttgcgtgacctcgcctcg
gaggtcgagtgggccaaggtcagcaacgtgcgaccggaggagtacccccggctcgccccg
gcgcgcgggcgcgaggtcaacaacgtcgacgcggagacggtcgcccgagtcttcggcacc
tacgaggacgtcaagcgcggtcagggccggatggacatggaggacgtcctcctgctcacc
gccgccctcctcgccgaggacgagcgggtggcggcgcaggtgcgccgccagtacaagttc
ttcgtcgtcgacgagttccaggacgtctcgccgttgcagtcggccctgctcgacctgtgg
ctgggtggtcgcgacgagatctgtgtggtcggcgaccccgcccagacgatctacagcttc
gccggcgccaacgcctcctacctccgtgagttctccgcgaagcactccggcaccacctcg
atcgagctggtgcgcaactatcgctccacccccgaggtcatcggtgcggccaacgcgttg
ctgtccggcaccagctcccgcggcgtccagctgacggcccaacgggcgtccgggccggcg
atcacctacgtcgagcacaccgacgaggtcgacgaggcagagtcggtcgcggcggaggtc
ctgcgcctgcaggacgagggtgtctcacccggatcgatggccgtgctgttccgcatcaac
gcccagtcggaggcgttcgaggacgcgctggccgcccgcaacattccctacgtggtgcgc
ggtgcggcccggttcttcgaccgccccgaggtgcgccaggcgatcaccctgctgcgcggc
accgcgcggtcgggcgcgggcggcgacgacctggtggacgacgtccgcgacacgcttgcg
ggcatgggctggacctccgagcccccgtcggggcgcggcaccgcgcgcgaccgttgggag
tcgttgcacgccctggtctcccaggccgagacgtacgccgcctccgacggctcctcgctg
ggcggattcgtcgacgacctcgaccgtcgcgcccaggagcagcacgccccggtggccgag
ggcgtcaccctggccaccctccacacggccaagggcctcgagtgggatgcggtgttcgtg
tgcggcgcccaggagggctccctgccgatcagcttcgcgcagacgcctgcggaggtcgag
gaggagcggcggctgctctacgtgggcatcacccgggctcgggtgcacctgcggatctcg
tggagcctggcccgcaagccggggggccgcaagacccggagtgcctccaggttcctcgcc
gcgctgcgccccgacgtgcacgagcccaggcctgctcgcaccaagaaggcggccagggcg
gccatgtgtggcacgtgcggccgcccgctgtccacggcgggcgagcgcaaggtggggcgc
tgcatcgactgtcccgccacctacgacgaggacctcttcgcccggctgaaggagtggcgc
cgcgagcgggccggcgaggacggcgtgccggcgtacgtcgtcttcaccgacaagaccctg
gaggcggtggccgagatgaagccggccgacgacgcgcagctgttgcgcatctccgggatc
ggcgcggccaaggtcgagcgctacggcgatgagctcctcgccctgatcaactga
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