Nocardioides sp. JQ2195: ncot_14195
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Entry
ncot_14195 CDS
T10874
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
noca Nocardioides sp. JQ2195
Pathway
noca03420
Nucleotide excision repair
noca03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
noca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ncot_14195
03430 Mismatch repair
ncot_14195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
noca03400
]
ncot_14195
Enzymes [BR:
noca01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ncot_14195
DNA repair and recombination proteins [BR:
noca03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ncot_14195
MMR (mismatch excision repair)
Other MMR factors
ncot_14195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QIX27621
UniProt:
A0A6H1A678
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All DBs
Position
complement(2974720..2977908)
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AA seq
1062 aa
AA seq
DB search
MRSAISIESPADLQRVMGTDFQVSPQQWAAISSDLEPAVVIAGAGSGKTALMAARVVHLV
VTGQVEAHEILGLTFTTKAARELSVRIRDALEKAGHAPGASAAVPGAEEGETLEPTVATY
NAYASSLLTEHGLRIGHEPDTRVMADASRYQLAARAINRHSGRIELLSDHPDTVVNYILG
LEGAMSEHLVDLDDVRAFQARELPRFRHAAETARAKADPRKVIHAMERREELLGLVATYR
RLKAELGLMDFSDQIALAARLADEHPEVGELERQKFKIVLLDEYQDTSVAQALMLKKLFG
GGHAVTAVGDPNQAIYGWRGASVSNILGFGRDFPRADGADVRVFPLTVNRRSDRRILEVA
NRLAQPLLDEFPQVQALEPAEQAGPGTVRTSVHETYAAELAWLAEQVRATHEAMAEPKWN
EIGVLTRDNKHAADVFDALSSREIPVEIVGLKGLLRLPEVAEVVATLTLLHDLTANSALL
TLLTGPRWTIGPRDLALLGKRARELAGVVSTPTAGQGIDEQLADAVEGADPTEIASLCDA
LDDPGEAAYSRAALDRFALLRSELRALRSHAGEPLLDLVRRIIDTTGIDVELASSVSPAA
AARRDNLDLFVKAVAEFQAIDGSVSLTALLAYLEAEDEMGTGLDVATPSESDSVKLLTVH
RAKGLEWDAVFVVGVCEEKFPTKQARTQWTSGPAVLPNDLRGDRHDLAALGGYEKPDLEA
FVKSARAKEAQEELRLGYVAFTRARHLLSVSSYLWNQNRKTPVGPSPYQLVVHEAIQEWG
ESAEAWLDKPDKETPNPLLASAVTAPWPQTEHTAETLRRLEAAEFVRSVDADAEDEVDLV
NGSTVATWDEELDRLLAEARRDRSTDIGVPLPSTLSATAVARLRDDPDAFARDLARPMPR
QPSPAARFGTRFHAWVEARFGQQNLFDPDELPGRADLGIDDESDLKELTALFADGPFGRR
EPHAIEAPFALVLGGQVVRGRIDAVYTEPDGGYLVIDWKTNQRATADPLQLGIYRLAWAE
LCGVPVERVRAAFHYVRTGRTVDHTDDLPGREELEKLVRPDG
NT seq
3189 nt
NT seq
+upstream
nt +downstream
nt
atgaggagcgcgatcagcatcgagagccccgccgacctgcagcgcgtgatgggcaccgac
ttccaggtcagcccccagcagtgggcagcgatctcctccgatctcgaaccggcggtggtg
atcgccggtgccggctccggcaagaccgccctgatggctgcacgggtggtccacctggtc
gtcaccgggcaggtcgaggcccacgagatcctcgggctcaccttcaccaccaaggcggcc
cgcgagctgtcggtccgcatccgtgacgcgctggagaaggccggccacgcccccggggcg
tcggccgctgtgcccggcgccgaggagggcgagaccctcgagcccacggtggccacctac
aacgcctacgccagctcactgctcaccgagcacggcctccgcatcggccacgagcccgac
acccgggtgatggccgacgcatcgcgctaccagctggccgcgcgtgcgatcaaccgtcac
agtgggcgcatcgagctgctcagcgaccaccccgacaccgtggtcaactacatcctcggt
ctcgagggcgcgatgagcgagcacttggtcgacctcgacgacgtgcgcgccttccaggcc
cgcgagctgccccgcttccggcacgcagcggagaccgcccgggccaaggccgatccccgc
aaggtcatccacgcgatggaacgccgcgaggagctgctcggcctcgtggccacctatcga
cgcctgaaggccgagctcggactgatggacttcagcgaccagatcgcgctcgcggcgcgg
ttggccgacgagcaccccgaggtcggcgagctcgaacgccagaagttcaagatcgtcctg
ctcgacgaataccaggacacctccgtggcgcaggccctgatgctcaagaagctcttcggt
ggggggcacgcggtcacggcggtgggcgaccccaaccaggccatctacgggtggaggggg
gcgtcggtctccaacatcctcggcttcggtcgtgacttcccgcgcgccgacggcgctgac
gtgcgggtcttcccgctgacggtgaaccgtcgctccgaccgtcgcatcctcgaggtcgcc
aaccggctggcccagccgctgctcgacgagttcccccaggtgcaggccctggagcctgcc
gagcaggccggcccgggcaccgtgcgcacctcggtgcacgagacctatgccgccgagctg
gcctggctcgccgagcaggtccgggccacccacgaggcgatggccgagccgaagtggaac
gagatcggcgtgctcacccgcgacaacaagcacgcggccgacgtgttcgacgccttgtcg
tcgcgcgagatcccggtcgagatcgtcggcctcaagggcctgttgcgcctgcccgaggtg
gccgaggtggtggcgacgttgaccctgctgcacgacctcaccgccaactcggcgctgctg
acgctgctcaccggcccacgttggaccatcggcccgcgcgacctggcactgctcggcaag
cgggcccgcgagctggccggtgtcgtctccacaccgaccgccggccaaggcatcgacgag
cagctcgcggatgccgtcgagggcgccgacccgacggagatcgcgtcgttgtgcgacgcg
ctcgacgacccgggcgaggcggcgtactcccgtgcagcgctcgatcgcttcgccctgctg
cgctcggagctgcgggcgttgcggtcccacgccggcgagccgttgctcgacctggtgcgg
cgcatcatcgacaccaccggcatcgacgtcgagctggcctcctcggtcagcccggcggca
gccgcccggcgcgacaacctcgacctgttcgtcaaggccgtcgccgagttccaggccatc
gacggctcggtcagcctcaccgcgctgctcgcctacctcgaggccgaggacgagatgggc
accggtctcgacgtggcgactccctccgagtccgactcggtgaagctgctcaccgtccac
cgcgccaagggcctcgagtgggacgccgtgttcgtggtcggggtgtgcgaggagaagttc
ccgaccaagcaggcccgcacacagtggacctccggtccggcggtcctccccaacgacctg
cgtggcgaccgccacgacctggccgcactggggggctacgagaaacccgacctggaggcc
ttcgtgaagtcggcccgggccaaggaggcacaggaggagctccggctcggctacgtggcc
ttcacccgggcccggcacctgctctcggtctcgtcctacctgtggaaccagaaccgcaag
accccggtgggcccgtccccctaccagctcgtcgtgcacgaggcgatccaggaatggggt
gagtcggccgaggcatggctcgacaagcccgacaaggagacaccgaacccgctgctggcg
agcgcggtcacggccccgtggccccagaccgaacacactgcggagaccctgagacgactc
gaggcagccgagttcgtccgctcggtcgacgcggatgccgaggacgaggtcgacctggtc
aacggatcgacggtcgccacctgggacgaggagctcgaccggctcctggccgaggcgcgc
cgggaccggtcgaccgacatcggggtgccgctgccgagcacgctctcggccaccgcggtg
gcccgactgcgggacgaccccgatgccttcgcgcgcgacctggccaggccgatgccccgt
cagccctctccggccgcccgcttcggcacccggttccacgcgtgggtcgaggcccggttc
ggccagcagaacctcttcgaccccgacgagctgcccgggcgtgccgacctgggcatcgac
gacgagtccgacctgaaggagctgaccgcactcttcgcagacggcccgttcggacgacgt
gagccgcacgcgatcgaggcgccgttcgccctggtcctcggtgggcaggtcgtgcgtggc
cgcatcgacgcggtctacaccgagcccgacggcggctacctggtcatcgactggaagacc
aaccaacgcgccaccgcagacccgttgcagctcggcatctatcgcttggcctgggccgag
ctgtgcggggtccccgtcgagagggtgcgtgctgccttccactacgtgcgcacgggcagg
accgtcgaccacaccgacgacctgcccggccgggaggagctcgagaagctggtccgtccc
gacggctga
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