Nocardioides sp. JQ2195: ncot_16275
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Entry
ncot_16275 CDS
T10874
Symbol
secD
Name
(GenBank) protein translocase subunit SecD
KO
K12257
SecD/SecF fusion protein
Organism
noca Nocardioides sp. JQ2195
Pathway
noca02024
Quorum sensing
noca03060
Protein export
noca03070
Bacterial secretion system
Brite
Secretion system [BR:
noca02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
ncot_16275 (secD)
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NCBI-ProteinID:
QIX27973
UniProt:
A0A6H1A633
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Position
complement(3430814..3433090)
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AA seq
758 aa
AA seq
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MSRGAFIRLLLVLGLLAGCVAIAMNVKPRLGLDLRGGTQIMLQAESTDRVEANAESVDRA
IEILRGRVDALGVSEPTLTRVGEDRILVELPDLQDPSRAVEAIGKTAQLSVHPVVAAAAS
KDAKPTKPGDEILQDTDSGQFLELAPAQLTGEDIEGADAGTRQDGVGWQVAVDFTGKGND
AFGDLSAKAACATGDANRIAIVLDKEIISSPTVDVSCGGRIDNGTSITGSFSESEAKDLA
ILIEGGALPIPVKIISQSTVGPTLGDAAIKSSAEAGVIGLIITGLFIIIVYRFVGFLAAI
ALTSYAVLSYAMLLALGSTLTLPGLAGFVLAIGLAIDANVLVFERAREEYAENPKAGMRR
ALQIGFNKAWTAIIDSNVTTLLAALLLFLLASGSVKGFGVTLAIGVIASMISALVIARVL
TEIGVTTKFVAKRPQITGLANVGRARTWLTKKNPNIMDKGKLWLGISGAALILALVGIFG
HGLNYGLEFTGGRSLEYTTQKAITADKARDVVSGVGLPEAVVQIVKGSDDVERVSIRAGD
ISDAQKAEIEEGLANEAGKTTQYSDDTVAASLGQELKEKALWAFIIALIAQMIYLAFRFH
WTFAVSAVGAMFHDVIIVTGIFAWLDKPIDGIFLASALTIVGLSVNDTVVVFDRIRERWQ
GTRTGTFSEVSNTACIETMPRTINTGLGAMFILAALAFLGGDSLQDFAIALLLGLIIGTY
SSVFSATPALIYLQKLSPFSREKKQKKERNPEDSGAVV
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgtggcgcattcatccgactcctgcttgtcctcggtctcctcgccggatgtgtg
gccatcgccatgaacgtcaagccccggctggggctcgacctgcgcggtggaacgcagatc
atgttgcaggccgagagcacggaccgggtcgaggcgaatgctgagtcggtcgatcgtgcg
atcgagatcctccgtggtcgagtcgacgccctcggtgtctccgagccgaccctgacccgc
gtcggtgaggaccgcatcctggtcgagctccccgacctccaggacccgtcccgtgcggtc
gaggcgatcggcaagaccgcccagctgagcgtgcacccggtggtggccgcggccgcgtcc
aaggacgcgaagcccaccaagcccggtgacgagatcctccaggacaccgactccggccag
ttcctcgagctggccccggcccagctgaccggtgaggacatcgagggcgccgacgccggc
acccggcaggacggggtcggctggcaggtggcggtcgacttcaccggcaagggcaacgac
gcgttcggtgacctgagcgccaaggcggcctgcgccacgggcgacgccaaccgcatcgcg
atcgtcctcgacaaggagatcatctcctcgccgacggtcgacgtgtcctgtggtggtcgc
atcgacaacggcaccagcatcaccggcagcttcagcgagagcgaggccaaggacctggcc
atcctgatcgagggcggcgccctgccgatcccggtcaagatcatctcgcagagcaccgtg
ggcccgaccctcggtgacgccgccatcaagtcctccgccgaggccggcgtcatcggcctg
atcatcaccggcctcttcatcatcatcgtctaccgcttcgtgggcttcctcgccgcgatc
gcgctgacctcctacgccgtcctctcctacgcgatgctgctggccctggggtccacgctg
accctcccgggcctggccggcttcgtgctcgccatcggtctggccatcgacgccaacgtg
ctggtcttcgagagagcgagggaggagtatgccgagaacccgaaggccggcatgcgccgt
gccctccagatcgggttcaacaaggcgtggacagcgatcatcgactccaacgtcaccacg
ctgctggctgccctgctgctgttcctgctggcctccgggtcggtcaagggcttcggtgtc
acgttggcgatcggtgtcatcgcgtcgatgatctccgcgctggtgatcgcccgcgtgctc
accgagatcggcgtgaccaccaagttcgtggccaagcgtccccagatcaccggtctggcc
aacgtcggccgggcacgcacctggttgaccaagaagaacccgaacatcatggacaagggc
aagctctggctcggcatctcgggtgccgccctgatcctcgcgctggtcggcatcttcggc
cacggcctcaactacggcctcgagttcaccggtggtcgctcgctcgagtacaccacccag
aaggcgatcacggccgacaaggcgcgtgacgtggtctccggcgtcggcctgcccgaggcc
gtcgtgcagatcgtcaagggcagcgacgacgtcgagcgggtctcgatccgcgccggcgac
atctccgacgcccagaaggcggagattgaggaggggctggccaacgaggccggcaagacc
acgcagtacagcgacgacacggttgcggccagcctgggccaggagctgaaggagaaggcg
ctctgggcgttcatcatcgccctgatcgcgcagatgatctatctggccttccggttccac
tggaccttcgccgtgtcggccgtgggtgcgatgttccacgacgtgatcatcgtgaccggc
atcttcgcgtggctcgacaagcccatcgacggcatcttcctcgcctcggcgctgaccatc
gtcggtctgtcggtcaacgacaccgtggtcgtcttcgaccggattcgagaacgctggcag
ggaacccggaccggtaccttctccgaggtcagcaacaccgcctgcatcgagacgatgccg
cgcaccatcaacaccggtctcggcgccatgttcatcctggccgcgctcgcgttcctcggt
ggcgactcgctgcaggacttcgcgatcgcgctgctgctgggcctgatcatcggtacctac
tcctcggtgttctccgcgaccccggcgctgatctacctgcagaagctctcgccgttctcg
cgggagaagaagcagaagaaggagcgcaacccggaggactcgggcgccgtcgtctga
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