Nocardioides sp. JQ2195: ncot_16715
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Entry
ncot_16715 CDS
T10874
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
noca Nocardioides sp. JQ2195
Pathway
noca03020
RNA polymerase
Brite
Enzymes [BR:
noca01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ncot_16715
Transcription machinery [BR:
noca03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ncot_16715
DNA repair and recombination proteins [BR:
noca03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ncot_16715
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
QIX28050
UniProt:
A0A6H1A7K2
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Position
complement(3519294..3523115)
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AA seq
1273 aa
AA seq
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MLDVNFFDQLQIGLATAEDIRGWSHGEVKKPETINYRTLKPERDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRSKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKVIYFAAYMITSVDEDARHRDLSSLEGKVDLERKRLEGRRDTSLEDRSKKLEED
LATLEAEGAKADARRKVRDGAEREMKQLRDRAQREIDRLDEVWNTFKSLKVQDLMGDELL
YREMKTWFGKYFEGHMGAAAIQKRLQDFDIAEEVENLRETIATGKGQKKVRALKRLKVVD
AFRKTGNQPIGMVLDAVPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDL
GAPEIIVNNEKRMLQEAVDSLFDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSGRSVIVSGPQLKLHQCGLPKQMALELFKPFVMKRLVDLSHAQNIKSAKRMVERSR
PVVWDVLEEVITEHPVLLNRAPTLHRLGIQAFEPQLIEGKAIQIHPLVCSAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSTNNILKPSDGRPVTMPTQDMIIGLFFLTTDREGPGEGRT
FSSQAEAIMAFDRKEISLQSRITLRIGDESVETTLGRSIFNDALPADYAYVNYEVGKKQL
GAIVNDLAERYTKVEVAASLDALKDTGFHWATRSGVTVSIDDVTTPADKVEILGKYEAQA
AKVQQQFERGLVTDDERRQELIEIWTQASNEVAKAMEKNFDRSNPIYMMVDSGASGNMMQ
IRQVAAMRGLVANPKGDIIARPIKANFREGLSVLEYFISTHGARKGLADTALRTADSGYL
TRRLVDVSQDVIIREDDCGTERGLPKVIGEVLPDGKVIKHENAETAAYARTAAVEVTHPE
TGDVLAAAGEDLGDVKIAELVAAGIVEVKVRSVLTCDARTGTCAKCYGRSLATGKLVDIG
EAVGIIAAQSIGEPGTQLTMRTFHTGGVASADDITQGLPRVVELFEARTPKGLAPISEVA
GRIEIEDGDKARKIVVTPDDGSEVVEYPVSRRSRLLVTDGDHVEVGDRFTQGTEDPKEVL
RILGVRRAQQHLVDEVQNVYRSQGVSIHDKHIEIIVRQMLRRITVLESGDTNLLPSDLVD
RVRFEEENRRVLSEGGKPASGRPELMGITKASLATESWLSAASFQETTRVLTDAAINGRS
DSLRGLKENVIIGKLIPAGTGLERYRNIRVEPTEEARAAAYSVSGYDTYDYEFGGTGGQA
VALDDFDFGSYQN
NT seq
3822 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgacgtgaacttcttcgaccagcttcagatcggccttgccactgcggaagacatc
cgcggatggagccacggtgaggtcaagaagccggaaaccatcaactaccgcaccctcaag
cccgagcgcgacggactcttctgcgagaagatcttcggcccgacccgggactgggagtgc
tactgcggcaagtacaagcgcgtccgcttcaagggcatcatctgtgagcgttgtggcgtc
gaggtcacccgctccaaggtgcgccgcgagcggatgggccacatcgagctcgccgctccc
gtgacccacatctggtacttcaagggtgtcccgtcccgcctgggctacctgctcgacctg
gcgccgaaggacctcgagaaggtcatctacttcgctgcctacatgatcacctccgtcgac
gaggacgcccgccaccgcgacctgtcctcgctcgagggcaaggtcgacctggagcgcaag
cgcctcgagggtcgccgcgacacctccctggaggaccgcagcaagaagctcgaggaggac
ctcgccacgctcgaggccgagggtgcgaaggccgacgcccgccgcaaggtgcgcgacggt
gccgagcgggagatgaagcagctgcgcgaccgtgcccagcgcgagatcgaccgcctcgac
gaggtctggaacacgttcaagtccctcaaggtccaggacctgatgggcgacgagctgctc
taccgcgagatgaagacctggttcggcaagtacttcgagggccacatgggcgctgcggcg
atccagaagcgcctgcaggacttcgacatcgcggaggaggtcgagaacctccgcgagacc
atcgccaccggcaagggccagaagaaggtccgcgccctgaagcgcctcaaggtcgtcgac
gccttccgcaagaccggcaaccagccgatcggcatggtcctcgacgccgtcccggtcatc
ccgccggacctgcgtccgatggtccagctcgacggtggtcgtttcgccacctcggacctg
aacgacctctaccgtcgcgtgatcaaccgcaacaaccgactcaagcgcctgctcgacctc
ggtgccccggagatcatcgtcaacaacgagaagcggatgctccaggaggccgtcgactca
ctgttcgacaacggccgtcgtggtcgtccggtgaccggcccgggcaaccgcccgctcaag
tcgctctccgacatgctcaagggcaagcagggtcgcttccgccagaacctgctcggaaag
cgcgtcgactactcgggtcgctcggtcatcgtgtccggtccgcagctgaagctgcaccag
tgcggcctgcccaagcagatggcgctggagctcttcaagccgttcgtgatgaagcgtctg
gtcgacctgtcgcacgcgcagaacatcaagtccgccaagcggatggtggagcgctcgcgt
ccggtcgtgtgggacgtcctcgaagaggtcatcaccgagcacccggtgctgctcaaccgt
gcacccacgctgcaccgcctcggcatccaggccttcgagccccagctgatcgagggcaag
gccatccagatccacccgctcgtctgctcggccttcaacgccgacttcgacggtgaccag
atggcggtgcacctgccgctgtccgccgaggcccaggccgaggcgcggatcctgatgctg
tcgacgaacaacatcctcaagccctccgacggtcgccccgtgaccatgcccacccaggac
atgatcatcggtctgttcttcctgaccaccgaccgcgagggcccgggcgaggggcgcacc
ttctcctcgcaggccgaggccatcatggcgttcgaccgcaaggagatctcgctgcagagc
aggatcaccctgcgcatcggcgacgagtccgtggagaccacgctgggccgctcgatcttc
aacgacgccctgccggccgactacgcctacgtcaactacgaggtgggcaagaagcagctc
ggcgcgatcgtcaacgacctggccgagcgctacaccaaggtcgaggtcgcggcgtccctg
gacgccctgaaggacaccggtttccactgggccacccggtccggtgtgacggtctccatc
gacgacgtcaccacgcctgccgacaaggtcgagatcctcggcaagtacgaggcccaggcg
gcgaaggtccagcagcagttcgagcgtggcctggtcaccgacgacgagcgccgtcaggag
ctcatcgagatctggacccaggcctccaacgaagtcgccaaggcgatggagaagaacttc
gaccggtccaacccgatctacatgatggtcgactcgggcgcctccggaaacatgatgcag
atccgtcaggttgccgccatgcgtggcctggtggccaacccgaagggcgacatcatcgcc
cggccgatcaaggccaacttccgtgagggcctctcggtcctggagtacttcatctccacc
cacggtgcccgcaagggtctggccgacaccgcgctgcggaccgctgactcgggctacctg
acccgtcgtctggtggacgtctcgcaggacgtcatcattcgtgaggacgactgcggcacc
gagcgtggtctgcccaaggtcatcggcgaggtgctgcccgacggcaaggtcatcaagcac
gagaacgccgagaccgcggcgtacgcccgcactgccgccgtcgaggtcacccacccggag
accggcgacgtcctcgccgctgccggtgaagacctcggcgacgtgaagatcgcggagctc
gtggctgccgggatcgtggaggtcaaggtccgctccgtgctgacctgcgacgcccgcacc
ggaacctgcgccaagtgctacggccgttcgctggccaccggcaagctggtcgacatcggt
gaggcggtcggcatcatcgccgcccagtccatcggtgagcccggcacgcagctcacgatg
cgtaccttccacaccggtggtgtggcctcggccgacgacatcacgcagggtctgccccgc
gtcgtcgagctgttcgaggcccggacccccaagggtctggccccgatctccgaggtcgcc
ggtcgcatcgagatcgaggacggcgacaaggcccgcaagatcgtggtcacccccgacgac
ggttccgaggtcgtcgagtaccccgtcagccgtcgctcgcgcctgctggtcaccgacggt
gaccacgtcgaggtgggcgaccgcttcacgcagggaacggaggaccccaaggaggtcctg
cgcatcctgggtgtccgtcgcgcccagcagcacctggtcgacgaggtgcagaacgtctac
cgcagccagggtgtgtcgatccacgacaagcacatcgagatcatcgtgcggcagatgctg
cgccggatcacggtgctcgagtccggtgacaccaacctgctcccgtccgacctggtcgac
cgggtccgcttcgaggaggagaaccgtcgcgttctctccgagggtggcaagccggcgtcg
ggtcgtccggagctgatgggcatcaccaaggcctcgctggccacggagtcgtggctctcg
gcggcctccttccaggagaccacccgagtgctcaccgacgccgcgatcaacggtcgctcc
gacagcctgcgtggcctgaaggagaacgtgatcatcggaaagctgatcccggccggcacc
ggcttggagcgctaccgcaacatccgggtggagccgaccgaggaggcccgcgctgcggcg
tactccgtctccggttacgacacctacgactacgagttcggcgggaccggcggccaggcc
gttgcgctcgacgacttcgacttcggttcctaccagaactga
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