Nocardioides sp. JQ2195: ncot_17725
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Entry
ncot_17725 CDS
T10874
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
noca Nocardioides sp. JQ2195
Brite
KEGG Orthology (KO) [BR:
noca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
noca03032
]
ncot_17725 (topA)
03400 DNA repair and recombination proteins [BR:
noca03400
]
ncot_17725 (topA)
Enzymes [BR:
noca01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
ncot_17725 (topA)
DNA replication proteins [BR:
noca03032
]
Prokaryotic type
DNA Topoisomerases
ncot_17725 (topA)
DNA repair and recombination proteins [BR:
noca03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ncot_17725 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Toprim_2
HC2
Motif
Other DBs
NCBI-ProteinID:
QIX28222
UniProt:
A0A6H1A590
LinkDB
All DBs
Position
complement(3730095..3732854)
Genome browser
AA seq
919 aa
AA seq
DB search
MAHKLVIVESPAKARTIAGYLGDGYVVESSIGHIRDLPNNAADTPAKIKDKPWGRLAVDV
ENGFEPYYVVPRDKKSHITKLKGLLKDADELFLATDEDREGEAIAWHLLDELKPKNIPVK
RMVFHEITKAAILAAVDNPREIAMDLVEAQETRRILDRLYGYEVSPVLWRKVMSGLSAGR
VQSVATRLVVDREKERIAFRAASYWDIDGSFDAGSGHDPRIFPGKLQTIDGSRVARGSDF
ADDGQLKQSSVDKAVVHLDRSRAEALVAGLQDTTYDVRSVESKPYKRSPYAPFRTTTLQQ
EASRKLGMGASATMSVAQRLYENGFITYMRTDSTTLSGSAIGAARDQVRELYGAEYLPDK
PRVYASKVKNAQEAHEAIRPAGEHFRTPAQTGLSGEQFRLYELIWMRTVASQMKDAVGQS
VSIRYGGAAATGEDVVFSSSGRVITFHGFLKAYVEGTDDKAAARDDQETRLPKLEEGNRV
TAASLQAQGHETKPPARFTEATLIKELEEREIGRPSTYASIIGTILNRGYVYKKGTALVP
AWLAFSVVRLLTDHFTRLISYEFTAGMEDILDEIAAGNRERETELAEFYYGSDKVAGLHR
LVNGLGEIDAKALATFPVAGEDSGIVLRVGRYGPYLEGPGDDGTPAGKRANVPDDLPPDE
LTLEKAKELLANPAGEETILGEHPETGLTVVAKNGRYGPYVTELLPEDPSTGSGQARKKS
KAKPRTGSLFKSMSLDTITLDDAVKLLSLPRVVGEDAEGVEITAQNGRYGPYLKKGTDSR
TLTSEEQLLSITLEEALAIYAQPKQRGRAAAAPPLKELGPDPVSGQPVVVKSGRFGDYVT
DGEYNATLRKDDTVEAITIERAAELLAERRAKGPAKKTAKKGAKKTAAKKSTAKKSTAKK
TAKKAPAKKATKKTAAKKS
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
gtggcacacaagttggtgatcgtcgagtcgcccgccaaggcccgcaccattgccgggtac
ctcggcgacggctacgtcgtcgagtcgtccatcgggcacatccgcgacctgccgaacaat
gccgccgacactccggcgaagatcaaggacaagccgtgggggcggctggcggtggacgtc
gagaacggcttcgagccctactacgtggtccccagggacaagaagagccacatcaccaag
ctcaagggtctcctcaaggacgccgacgagctcttcctcgccaccgatgaggaccgggag
ggagaggcgatcgcctggcacctcctcgacgagctcaagcccaagaacatccccgtgaag
cggatggtcttccacgagatcaccaaggccgccatcctggccgccgtcgacaacccgcgc
gagatcgcgatggatctcgtcgaggcccaggagacccgtcgcatcctcgaccgtctctac
ggctacgaggtctccccggtgctgtggcgcaaggtgatgagcggtctgtccgccggccgc
gtgcagtccgtggccacccgcctcgtggtcgaccgcgagaaggagcggatcgccttccgt
gcggcctcctactgggacatcgacggctccttcgacgccggctccggccacgatccacgc
atcttcccggggaagctgcagaccatcgacggctcccgcgtcgcccgcggttccgacttc
gccgacgacggccagctgaagcagtccagcgtggacaaggccgtggtccacctcgaccgc
agtcgcgccgaggccctggtcgccggcctgcaggacacgacgtacgacgtccgcagcgtc
gagtcgaagccctacaagcgctctccctatgcgccgttccgcaccaccacgctccagcag
gaggccagccgcaagctcggcatgggcgcctcggccaccatgtcggtggcccagcgcctc
tacgagaacggcttcatcacctacatgcgcaccgactccacgacgctgtccggctccgcg
atcggcgcggcgcgcgaccaggtccgcgagctgtacggcgccgagtacctcccggacaag
ccgcgcgtctacgcctcgaaggtgaagaacgcgcaggaggcgcacgaggcgatccgtcct
gccggcgaacacttccgcaccccggcccagaccgggctgagcggcgagcagttccgcctc
tacgagctgatctggatgcgcaccgtcgcctcgcagatgaaggacgcggtcggccagtcg
gtctccatccgttacggcggcgcagccgcgaccggcgaggacgtcgtcttctcctcgagt
ggccgggtgatcaccttccacggcttcctgaaggcctacgtcgagggcaccgacgacaag
gcagccgcgcgtgacgaccaggagacccgtctgccgaagctcgaggagggcaaccgggtc
acggcggcctccctccaggcacagggccacgagaccaagccaccggcccgcttcaccgag
gccacgctgatcaaggagctcgaggagcgtgagatcggccgcccgtcgacctacgcctcc
atcatcggcacgatcctgaaccgagggtacgtctacaagaagggcaccgctctggtgccg
gcctggctggcgttctccgtggtccggctgctgaccgaccacttcacccgtctcatctcc
tacgagttcaccgcggggatggaggacatcctcgacgagatcgctgcgggcaaccgtgag
cgcgagaccgagctggccgagttctactacggctccgacaaggtcgccgggctgcaccgc
ctggtcaacggactcggtgagatcgacgcgaaggcgctggccaccttcccggtcgccggc
gaggacagcggcatcgtgcttcgcgtcggccgctacgggccctacctcgaggggcccggc
gacgacggcaccccggcgggcaagcgcgccaacgtgcccgacgatctgccacccgacgag
ctcacgctcgagaaggccaaggagctgctggccaaccccgccggtgaggagacgatcctc
ggtgagcaccccgagaccggcctgaccgtcgtggccaagaacggtcgctacggcccctac
gtgaccgagctgctgcccgaggacccttcgacaggctcaggacaggcgcggaagaagagc
aaggccaagccccgcaccgggtcgctgttcaagtcgatgagcctcgacacgatcaccctc
gacgacgcggtgaagctgctgtcgctcccgcgggtggtcggtgaggacgccgagggcgtc
gagatcaccgcgcagaacggtcgctacggcccctacctcaagaagggcaccgactcgcgc
accctcacctcagaggagcagctgctcagcatcacgctcgaggaggcgctggcgatctat
gcccagcccaagcagcggggtcgtgccgcagcggcgccgccgctcaaggagctcggcccc
gacccggtgtccgggcagccggtcgtggtgaagtccggccgcttcggtgactacgtgacc
gacggtgaatacaacgccacgctgcgcaaggacgacacggtcgaggcgatcacgatcgag
cgggccgccgagctgctcgcggagcgtcgcgccaaggggcccgcgaagaagacagccaag
aagggcgccaagaagacggcggcgaagaagtcgacggccaagaagtcgacggccaagaag
accgcgaagaaggcaccggcgaagaaggccaccaagaagaccgcagccaagaagtcctga
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