Nocardiopsis sp. LDBS0036: UIS43_01185
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Entry
UIS43_01185 CDS
T11195
Symbol
pafA
Name
(GenBank) Pup--protein ligase
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
nocb Nocardiopsis sp. LDBS0036
Brite
KEGG Orthology (KO) [BR:
nocb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
nocb03051
]
UIS43_01185 (pafA)
Enzymes [BR:
nocb01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
UIS43_01185 (pafA)
Proteasome [BR:
nocb03051
]
Prokaryotic proteasome
Bacterial regulatory particles
UIS43_01185 (pafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
Motif
Other DBs
NCBI-ProteinID:
XEA86159
LinkDB
All DBs
Position
319511..320869
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AA seq
452 aa
AA seq
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MERRIFGLENEYGVTCTFRGQRRLSPDEVARYLFRRVVSWGRSSNVFLRNGARLYLDVGS
HPEYATPECDSLVDLVAHDKAGERILEGLQVDAEQRLHEEGIAGDIYLFKNNTDSAGNSY
GCHENYLVGRHGEFGRLADVLIPFLVTRQIICGAGKVLQTPRGALFCVSQRAEHIWEGVS
SATTRSRPIINTRDEPHADAERFRRLHVIVGDSNMSETTTLLKLGSTDLVLRMIEAGVVM
RDYTLENPIRAIREVSHDMTGRRKVRLANGREASALEIQREYLDKVQSYVDRHGTDATGK
RVLELWQRTLEAVETQNLETVSREIDWVAKYLLLERYRDKHDLSLSSPRVAQLDLTYHDI
HRDRGLFYLLQGRGQMERVVGDLKIFEAKSVPPQTTRARLRGEFIRRAQEQRRDFTVDWV
HLKLNDQAQRTVLCKDPFKSVDERVEKLIAGM
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
gtggaacgacggatcttcgggctggagaacgagtacggggtcacgtgcaccttccgtgga
cagcgccgcctgtccccggacgaggtcgcccgctacctcttccgcagggtggtctcctgg
gggcgcagcagcaacgtgttcctgcgcaacggcgcccgcctgtacctggacgtgggcagc
caccccgagtacgccacccccgagtgcgacagtctcgtggacctggtggcccacgacaag
gccggcgagcgcatcctggaggggctgcaggtcgacgccgagcagcgcctgcacgaggag
ggcatcgccggggacatctacctgttcaagaacaacaccgactcggcgggcaactcctac
ggctgccacgagaactacctcgtgggacggcacggcgagttcggacgcctggccgacgtg
ctcatccccttcctggtcacccgccagatcatctgcggcgccggaaaggtgctccagacc
ccccgcggcgccctgttctgcgtcagccagcgcgccgagcacatctgggagggcgtctcc
tcggccaccacccgctcgcgccccatcatcaacacccgcgacgagccgcacgcggacgcc
gagcgcttccggcgcctgcacgtcatcgtcggcgactccaacatgagcgagaccaccacc
ctgctcaagctgggctccaccgacctggtgctgcgcatgatcgaggccggggtggtcatg
cgcgactacacgctggagaacccgatccgggccatccgcgaggtcagccacgacatgacc
ggccgccgcaaggtacgcctggccaacgggcgcgaggccagcgcgctggagatccagcgc
gagtacctggacaaggtgcagagctacgtcgaccggcacggcaccgacgccaccggcaag
cgcgtcctggagctgtggcagcgcaccctggaggcggtcgagacccagaacctggagacc
gtctcccgcgagatcgactgggtggccaagtacctgctgctggagcgctaccgcgacaag
cacgacctgtccctgtcctcgccgcgggtggcccagctcgacctgacctaccacgacatc
caccgcgaccggggactgttctacctgctccagggccgcggccagatggaacgggtggtc
ggcgacctcaagatcttcgaggccaagtcggtgccgccgcagaccacgcgggcccggctg
cgcggcgagttcatccggcgcgcccaggagcagcgccgcgacttcacggtggactgggtg
cacctcaagctcaacgaccaggcccagcgcacggtgctgtgcaaggaccccttcaagtcg
gtggacgagcgggtggagaagctcatcgccggtatgtag
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