Nocardiopsis sp. LDBS0036: UIS43_02785
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Entry
UIS43_02785 CDS
T11195
Name
(GenBank) RNA-guided endonuclease TnpB family protein
KO
K07496
putative transposase
Organism
nocb Nocardiopsis sp. LDBS0036
Brite
KEGG Orthology (KO) [BR:
nocb00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
UIS43_02785
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Gene cluster
GFIT
Motif
Pfam:
OrfB_IS605
Cas12f1-like_TNB
HTH_OrfB_IS605
Motif
Other DBs
NCBI-ProteinID:
XEA86458
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Position
710382..711614
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AA seq
410 aa
AA seq
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MTNKSVKRAFRYRFYPSDAQAAELSRTFGCVRLVYNRALAERSTAWHQRRERVGYSHTSA
MLTAWKKTDELSFLTEVSCVPLQQTLRHLHTAFRNFFDRRAKYPRFKSKKTSRASAEYTA
SAFRYRDGHLTLAKMTEPLDIVWSRPLPEGARPSTVTVSRDAAGRWFVSLLCEDTVESAP
AANDAVGVDMGVTSLVVLSTGEKVANPRHEQRDRAKLARAQRALARKAKGSANRDKARRK
VARVHARITDRRRDFLHKLSTRLVRENQVVVIEDLTVRNMVRNRRLARAISDAAWRELRT
MLEYKCAWYGRDLVVVDRFFPSSKLCSTPGCGYLNVSLPLRVREWTCPGCGTTHDRDVNA
ANNLEAAGLAVLACGAGVRPQRESSRTGRPAVKQEGHGATRDEALASNHR
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgaccaacaagagcgtgaagcgggcgtttcggtaccgcttctacccgagtgatgcgcag
gcggctgagctgtcgcgcacgttcgggtgcgtgcgcctggtctacaaccgcgccctggcc
gaacgcagcaccgcctggcaccagcgccgggaacgggtgggctactcccacacctcggcc
atgctgaccgcttggaagaagacggacgagctgtccttcctcaccgaggtctcctgcgtc
ccccttcagcagacgctgcgccacctgcacaccgcctttcgcaacttcttcgaccggcgc
gcgaagtatccgcggttcaagtccaagaagacgtcgcgtgcctcggcggagtacaccgcg
agcgcgttccgctaccgcgacggccacctgaccctggccaagatgaccgaacccctggac
atcgtgtggtcgcgccccctgcctgaaggagcaaggccgtccacggtgacggtgtcccgg
gatgcggccgggcgctggttcgtgtccctgctgtgcgaggacaccgtcgagtcggctccg
gccgccaacgacgcggtgggtgtggacatgggtgtgacgtcgctggtggtgttgtccacg
ggggagaaggtggccaacccccgccacgaacaacgcgaccgcgccaagctggcccgcgcc
cagcgggcgctggcccgcaaggccaagggcagcgcgaaccgggacaaggcccgccgcaag
gtcgcgcgggtgcacgcccgcatcaccgaccgcaggcgcgacttcctgcacaagctctcc
actcgactcgtccgcgagaaccaagtggtcgtgatcgaggacctgacggtgcgcaacatg
gtcagaaaccgcagactcgcccgggcgatttcggatgcggcctggcgtgagctgcgcacg
atgttggagtacaagtgcgcctggtacggacgcgatctggtcgtggtggaccggttcttt
ccctcctccaagttgtgttcgacgcccgggtgcgggtacctcaatgtgtcgttgccgttg
cgtgtacgggagtggacgtgccccggctgcgggaccacccatgatcgggatgtgaatgcg
gcgaacaatctcgaagccgccgggctggcggtgttggcctgtggagctggtgtgagacct
caacgggagtcctcccggacggggcgaccggcggtgaagcaggaaggccacggggcgacc
cgtgacgaggcgttggcctcgaaccaccggtag
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