Nocardiopsis sp. LDBS0036: UIS43_03300
Help
Entry
UIS43_03300 CDS
T11195
Name
(GenBank) RNA-guided endonuclease TnpB family protein
KO
K07496
putative transposase
Organism
nocb Nocardiopsis sp. LDBS0036
Brite
KEGG Orthology (KO) [BR:
nocb00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
UIS43_03300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OrfB_IS605
Cas12f1-like_TNB
HTH_OrfB_IS605
DUF7125
Motif
Other DBs
NCBI-ProteinID:
XEA86557
LinkDB
All DBs
Position
complement(829126..830358)
Genome browser
AA seq
410 aa
AA seq
DB search
MARKSVKRAFRYRFYPTDAQAAELSRTFGCVRLVYNRALAERTTAWHQRRERVGYPHTSA
MLTAWKSTEELSFLTEVSCVPLQQTLRHLHTAFGNFFDRRAQYPRFKSKKTSRASAEYTR
SAFRYRDGRLTLAKMAEPLAIVWSRPLPEGARPSTVTVSRDAAGRWFVSLLCEDTITSAP
AVNNAVGVDAGITSVVTLSTGEKVANPRHEQRDRAKLARAQRALSRKARGSTNRDKARRR
VARVCARITDRRRDFLHKLSTRLVRENQVVVIEDLSVRNMVKNRRLSRAISDVAWRELRS
MLEYKCAWYGRDLVVVDRFFPSSKLCSTPGCGYLNASLSLRVREWTCPGCGVAHDRDVNA
ALNLEAAGLAVVACGAGVRPQRESSRTGRPAVKQEGHGATRDEALASNRR
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggccaggaagagcgtgaagcgggcgtttcggtaccgcttctatcccactgatgcgcag
gcggctgagctgtcgcgcacgttcgggtgcgtgcgcctggtctacaaccgcgccctggcc
gaacgcaccaccgcctggcaccagcgccgcgaacgggtgggctacccccacacctcggcg
atgctcaccgcctggaagagcactgaggagctgtccttcctcaccgaggtctcctgcgtc
ccgctgcaacagacgctgcgccacctgcacaccgccttcggcaacttcttcgaccgccgc
gcgcagtacccgcggttcaagtccaagaagacgtcccgggcctcggcggagtacacccgg
tcggcctttcgctaccgcgacggccgtctgacattggccaagatggccgaacccctggcc
atcgtgtggtcgcggcccctgcccgaaggagcacgcccctccacggtcacggtctcgcgc
gatgcggccgggcgctggttcgtctcgctcctgtgcgaggacaccatcacgtcggccccg
gccgtcaacaacgcggtcggtgtcgatgccggaatcacctccgtggtgaccttgtccacg
ggggagaaggtggccaacccccgccacgagcaacgcgaccgggcgaagctggcccgggct
cagcgggcgctgtcgcgtaaggccaggggcagcacgaaccgggacaaggcgcgtcgcagg
gtggcgcgggtgtgcgcccgtatcaccgaccggcgtcgggactttttgcacaagctctcc
actcgactcgtccgtgagaaccaagtggtcgtgatcgaggacctgtcggtgcgcaacatg
gtcaagaaccgtcggctttcccgggcgatctccgatgtggcctggcgtgagctgcgcagc
atgctggagtacaagtgcgcttggtatgggcgggacctggtcgtggtggaccggttcttt
ccctcctccaagttgtgctcgacgcccgggtgcgggtacctcaatgcgtcgttgtcgctg
cgtgtacgggagtggacgtgtcccggttgtggggtggctcatgaccgggatgtgaacgcg
gcgctcaatctcgaagccgccgggctggcggttgttgcctgtggagctggtgtgagacct
caacgggagtcctcccggacggggcgaccggcggtgaagcaggaaggccacggggcgacc
cgtgacgaggcgttggcctcgaaccgccgttag
DBGET
integrated database retrieval system
